Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_F04
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0163 - 1125364-1125422,1126062-1126205,1126640-1126756,112... 73 2e-13
12_01_0287 - 2152179-2152424,2153300-2153339,2153612-2153831,215... 71 9e-13
01_05_0449 - 22349299-22349310,22349842-22350011,22350232-223503... 65 2e-11
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 66 3e-11
12_02_0419 + 18916995-18917090,18917703-18917851,18917873-189180... 66 5e-11
09_01_0023 - 434250-434408,435614-435684,436053-436143,436208-43... 55 7e-08
02_04_0256 + 21331396-21332268 51 1e-06
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 41 0.001
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265... 37 0.019
01_07_0154 - 41532220-41533252,41533786-41533971,41534759-415350... 35 0.076
01_06_1692 - 39232475-39232867,39233176-39233310,39233770-392339... 35 0.076
11_03_0176 - 11260900-11261286,11261459-11261593,11262971-112631... 35 0.100
01_06_1488 + 37716986-37717076,37717424-37717558,37717755-377178... 35 0.100
03_05_0444 + 24396375-24396584,24396968-24397021,24397426-243975... 31 1.2
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 30 2.1
02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772... 30 2.8
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 29 3.8
01_06_0083 + 26283492-26283756,26284255-26284467,26284620-262847... 29 3.8
11_02_0102 + 8314115-8314540 29 6.6
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 6.6
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 8.7
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 28 8.7
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 28 8.7
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 28 8.7
>05_01_0163 -
1125364-1125422,1126062-1126205,1126640-1126756,
1126835-1126926,1127942-1128022,1128323-1128378,
1128496-1128559,1128645-1128748,1129578-1129724,
1129876-1129989,1130070-1130153
Length = 353
Score = 73.3 bits (172), Expect = 2e-13
Identities = 45/136 (33%), Positives = 71/136 (52%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+ T + LD L +GG+ G LTE++G G GKTQ CL+L +P+ GLN LYI
Sbjct: 82 LATTLRGLDEAL-HGGIPAGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVLYI 140
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT + F+ R EI S + + E ++ R+ + + +F + ++ V
Sbjct: 141 DTESKFSSRRMIEIGEKSFPQIFRQEGL----AQKMAGRILVLRPTSLSEFTKSLEQMKV 196
Query: 604 FLAEHPRVKLIVIDSI 651
L +H VKL+V+DS+
Sbjct: 197 TLLQHD-VKLLVVDSM 211
>12_01_0287 -
2152179-2152424,2153300-2153339,2153612-2153831,
2153917-2153995,2154087-2154155,2154237-2154329,
2154411-2154477,2154579-2154640,2154729-2154774,
2155359-2155404,2155490-2155547,2155717-2155755,
2155849-2155920,2156067-2156158,2157036-2157135
Length = 442
Score = 71.3 bits (167), Expect = 9e-13
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
T ++L K + I T SQ LD +L GG++ +TE G +GKTQL LC S Q+
Sbjct: 94 TGSDLLIKRKSVVRITTGSQALDKLLG-GGIETLCITEAFGEFRSGKTQLAHTLCVSAQL 152
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + G N + YIDT F P R I + + LD + Y A+
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERI-----------VPIAERFGMDANAVLDNIIYARAY 201
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
E + ++ +AE P +L+++DS+ F+ S + +R L + ++ L +
Sbjct: 202 TYEHQYNLLLGLAAKMAEEP-FRLLIVDSVIALFRVDFSGRGELAERQQKLAQMLSRLTK 260
Query: 730 IAMEGLIAVVLVNEM 774
IA E +AV + N++
Sbjct: 261 IAEEFNVAVYITNQV 275
>01_05_0449 -
22349299-22349310,22349842-22350011,22350232-22350303,
22351740-22351806,22352516-22352647,22352844-22353070,
22353150-22353359,22353565-22353687,22353971-22354075,
22354324-22354435
Length = 409
Score = 65.3 bits (152), Expect(2) = 2e-11
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Frame = +1
Query: 355 LQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILT---ASLLK----CQKIEPS-- 507
+QL +VQIP GL +A+YIDT +F R +I + +L+ C P+
Sbjct: 161 IQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQ 220
Query: 508 YLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQ 684
E L ++Y + A +N + FL EH V++++IDS+TF F++ +
Sbjct: 221 EKLKPESFLADIYYFRICSYTEQIAVINYLEKFLGEHKDVRIVIIDSVTFHFRQDFDDMA 280
Query: 685 KRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR 783
RT +L L +++ +AVVL+N+++T+
Sbjct: 281 LRTRVLSGLSLKLMKLSKAYNLAVVLLNQVTTK 313
Score = 21.8 bits (44), Expect(2) = 2e-11
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 823 DAWXHRCNXRVLL 861
D+W H C R++L
Sbjct: 351 DSWSHSCTNRLIL 363
>11_06_0395 +
23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 66.5 bits (155), Expect = 3e-11
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GG++ GS+TE+ G +GKTQLC LC + Q+P G +ALYID F P R
Sbjct: 95 GGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQR---- 150
Query: 466 LTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVID 645
LL +I + N + L+ + Y A+ + + + + E R L+++D
Sbjct: 151 ----LL---QIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIE-TRFALMIVD 202
Query: 646 SITFPFKEGIS----VQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
S T ++ S + R + + + LQ++A E +AVV+ N++
Sbjct: 203 SATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQV 249
>12_02_0419 +
18916995-18917090,18917703-18917851,18917873-18918063,
18918178-18918269,18918456-18918550,18918920-18919049,
18919178-18919219
Length = 264
Score = 65.7 bits (153), Expect = 5e-11
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
+A++L + + + T S+ LD IL +GG++ GS+TE+ G +GKTQLC LC + Q+
Sbjct: 119 SASQLHAQRLEIIQVTTGSRELDKIL-DGGIETGSITEIYGEFRSGKTQLCHTLCVTCQL 177
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEI 465
P G +ALYID F P R +I
Sbjct: 178 PLDQGGGEGKALYIDAEGTFRPQRLLQI 205
>09_01_0023 -
434250-434408,435614-435684,436053-436143,436208-436321,
436523-436657,436832-436913,437095-437195,437425-437490
Length = 272
Score = 55.2 bits (127), Expect = 7e-08
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+PT Q +D +L GG++ G LTE+ G +GKTQ+C LC++ + G+ +Y+
Sbjct: 50 LPTGLQGVDALLG-GGLRQGQLTEITGQSSSGKTQVC--LCSASHVAARQLGV---VMYL 103
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT+ +F+P+R I+ + + EP + E + + + F I ++++ +
Sbjct: 104 DTSNSFSPSRIARIVDGFPISLVR-EPKNV-RLERVMSSIICKSVFDIFDLFEVLHQLEL 161
Query: 604 FLAEH-----PRVKLIVIDSIT---FPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVV 759
L ++ L++IDSI+ P G + R+ ++ M L+++A E ++V+
Sbjct: 162 SLKSKVNNGGNKICLLIIDSISSILAPINGGKYPRGRSMMISVAMI-LKKLAYEHNLSVL 220
Query: 760 LVNEM 774
+ N M
Sbjct: 221 VTNHM 225
>02_04_0256 + 21331396-21332268
Length = 290
Score = 51.2 bits (117), Expect = 1e-06
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD +L+ GG+ S+TE+ G +GKTQLCLQL ++ P LS L+A L++ ++ F
Sbjct: 50 LDRLLS-GGLPPASVTEIAGESASGKTQLCLQL--ALLAP--LSPLSASCLFLHSDLPFP 104
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEH-- 618
R + + S + LD + A + ++R LA
Sbjct: 105 LRRLRGLAPKS--------------RPDLLDHVLVAAAHSPSDLISLLSRAQRLLAHPGR 150
Query: 619 -PRVKLIVIDSITFPFKEGI-----SVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
P V+LI++DSI F+ +++R+ L FR A L+ +A VV+ N++
Sbjct: 151 LPPVRLILVDSIASLFRADFDASPADLKRRSALFFRISAKLKELAHRHRCVVVVTNQV 208
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
T ++L K + I T SQ LD +L GG++ +TE G +GKTQL LC S QI
Sbjct: 94 TGSDLLIKRKSVVRITTGSQALDELLG-GGIETLCITEAFGEFRSGKTQLAHTLCVSTQI 152
>06_01_0369 +
2651192-2651862,2652103-2652158,2652816-2652874,
2653094-2653165,2653356-2653439,2654522-2654629,
2655543-2655605,2655733-2655813,2656316-2656421,
2657111-2657244,2657753-2657830,2658462-2658500,
2658673-2658755,2659228-2659300,2659842-2660012
Length = 625
Score = 37.1 bits (82), Expect = 0.019
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSG 399
Q E +P F + +L GGV GSL + G PG GK+ L LQL AS+ + +G
Sbjct: 217 QSEWRIPLSGNFGMEIARVLG-GGVVPGSLILVGGDPGVGKSSLILQL-ASIMSENIGAG 274
Query: 400 LNAEALYI 423
++ +Y+
Sbjct: 275 ESSAIVYV 282
>01_07_0154 -
41532220-41533252,41533786-41533971,41534759-41535039,
41535184-41535318,41535427-41535573,41535841-41536010,
41536110-41536197,41536999-41537219,41537725-41537810,
41537916-41537962
Length = 797
Score = 35.1 bits (77), Expect = 0.076
Identities = 26/71 (36%), Positives = 31/71 (43%)
Frame = +1
Query: 238 PSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEAL 417
P I T S LD L GG+ G + EL G +GKT L L + Q G A
Sbjct: 98 PVISTGSLKLDIALGIGGLPKGRMVELFGKEASGKTTLALHVVKEAQ---KKGGCCA--- 151
Query: 418 YIDTNTNFTPT 450
YID F P+
Sbjct: 152 YIDAENAFNPS 162
>01_06_1692 -
39232475-39232867,39233176-39233310,39233770-39233916,
39234131-39234303,39235201-39235288,39235508-39235725,
39235968-39236025,39236259-39236315,39237022-39237099
Length = 448
Score = 35.1 bits (77), Expect = 0.076
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
+P + T S +LD L GG+ G + E+ G +GKT L L + A Q
Sbjct: 116 VPVVSTGSFSLDLALGTGGLPKGRVIEVYGPEASGKTTLALHVIAEAQ 163
>11_03_0176 -
11260900-11261286,11261459-11261593,11262971-11263117,
11263754-11263926,11264661-11264748,11265587-11265804,
11266367-11266424,11267133-11267219
Length = 430
Score = 34.7 bits (76), Expect = 0.100
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
+P I T S LD L GG+ G + E+ G +GKT L L + A Q
Sbjct: 100 VPVISTGSFALDMALGIGGLPKGRVVEIYGPEASGKTTLALHIIAEAQ 147
>01_06_1488 +
37716986-37717076,37717424-37717558,37717755-37717831,
37717934-37718181,37718503-37718559,37718665-37718800,
37718944-37719001,37719110-37719195,37719270-37719326,
37719537-37719557,37720553-37720954,37721500-37721647,
37721940-37722036,37724065-37724202,37724496-37724598,
37724792-37724828,37724905-37725014,37725141-37725164
Length = 674
Score = 34.7 bits (76), Expect = 0.100
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPK-----VLSGLNAEALYIDTNTNFTPTRFKEI 465
G++ E+ G +GK+QL L +PK GL +Y+D + F R +I
Sbjct: 437 GNVVEIAGPSNSGKSQLLLTAAVQCILPKEWKGTYFGGLGKVVMYLDLDCRFDVLRLAQI 496
Query: 466 LTASLLK-CQKIEPSYLFNEEEALDRLHYINAFGIEK-FCACMNR 594
L + + C P+ NEE A D N+F F CM R
Sbjct: 497 LRNRIGECCGSTNPT---NEEFAKDGA--TNSFSENTLFSECMKR 536
>03_05_0444 +
24396375-24396584,24396968-24397021,24397426-24397517,
24397610-24397685,24397838-24397900,24398002-24398094,
24398694-24398819,24398895-24398999,24399071-24399127,
24399149-24399274,24399348-24399424,24400312-24400384,
24400430-24400492
Length = 404
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+ P+ LD L GG+ G + E+ G +GKT L L A VQ L A+
Sbjct: 121 TFPSGCLTLDFALG-GGLPKGRVVEVYGPESSGKTTLALHAIAEVQ------KLGGNAML 173
Query: 421 IDTNTNFTPTRFKEI 465
+D F P K +
Sbjct: 174 VDAEHAFDPAYSKAL 188
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSG 399
+G ++ G ++ LLG PG+GKT L L L + +SG
Sbjct: 174 SGIIRPGRMSLLLGPPGSGKTSLLLALAGKLDSTLKVSG 212
>02_05_0136 +
26174965-26175849,26176965-26177030,26177124-26177258,
26177369-26177434,26177516-26177701,26177777-26177863,
26177985-26178098,26178174-26178298,26178375-26178483,
26179298-26179423,26179511-26179831,26180146-26180269,
26180405-26180529
Length = 822
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 316 LLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQK 495
L+GLPGTGKT L + ++P + + +++ R +++ + +K
Sbjct: 384 LVGLPGTGKTLLAKAVAGEAEVPFISCSASE---FVELYVGMGAARVRDLFA----RAKK 436
Query: 496 IEPSYLFNEE 525
PS +F +E
Sbjct: 437 ESPSIIFIDE 446
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 175 PNMSNYKIHTATELWQKETCLPSIPTFSQNLDHIL-ANGGVQLGSLTELLGLPGTGKTQL 351
P + N I+ A EL C T + + I A G ++ +T LLG PG+GKT L
Sbjct: 71 PTLLNCAINAAQEL---AACAHMCTTRKKPMKIINEATGTIRPSRMTLLLGAPGSGKTTL 127
Query: 352 CLQLCASVQIPKVLSG 399
L + + G
Sbjct: 128 LKALAGKLDSSLKMKG 143
>01_06_0083 +
26283492-26283756,26284255-26284467,26284620-26284771,
26284884-26285157,26285277-26285485
Length = 370
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 541 LHYINAFGIEKFCACMNRISVFLAEHPRVKLIVID 645
L + NAF A +N +S A+HP V+LI D
Sbjct: 252 LRWFNAFSAAHNQALLNEVSRLKAQHPGVRLIYAD 286
>11_02_0102 + 8314115-8314540
Length = 141
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 801 CCGGLVGRRLGPSLQXTGTVVHPSELGGXG 890
C G +GRR P+++ T + + +LGG G
Sbjct: 61 CVDGSLGRRRSPAVEVTSSSLKRKQLGGGG 90
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSG 399
+G ++ +T LLG PG GKT L L L +V +SG
Sbjct: 68 SGIIKPHRMTLLLGPPGAGKTTLLLALAGNVPSGLKVSG 106
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 340 KTQLCLQLCA-SVQIPKVLSGLNAEALYIDT--NTNFTPTRFKEILTASLLKCQKIEPSY 510
KT C +LCA ++ L N E T + T + IL L QK++PS+
Sbjct: 386 KTCACAELCAFGIEDSSYLEKYNEEQQCAMTCIMSKVVTTTIQLILYGGLQSLQKVDPSF 445
Query: 511 LFNEEEALDRL 543
F L+RL
Sbjct: 446 DFRGIVVLNRL 456
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 247 PTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
PT S+N+ +L G+QL L G PG GKT L + L
Sbjct: 1626 PTTSKNVFRVLR--GMQLPKPLLLEGSPGVGKTSLIVAL 1662
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSG 399
+G V+ +T LLG PG+GKT L + L ++ +SG
Sbjct: 170 SGIVKPHRMTLLLGPPGSGKTSLLMALAGTLPSTVKVSG 208
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSG 399
+G ++ +T LLG PG+GKT L L L ++ +SG
Sbjct: 223 SGIIKPRRMTLLLGPPGSGKTTLLLALAGKLEDNLKVSG 261
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,082,678
Number of Sequences: 37544
Number of extensions: 474407
Number of successful extensions: 1399
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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