Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_F04
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S. cer... 121 4e-27
AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S. cer... 121 4e-27
AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein. 121 4e-27
D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein. 83 2e-15
D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein. 83 2e-15
CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein. 83 2e-15
AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA hom... 83 2e-15
AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein. 83 2e-15
AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein. 83 2e-15
BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA hom... 79 2e-14
AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein. 77 1e-13
Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein. 76 2e-13
BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 76 2e-13
AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 76 2e-13
Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein. 75 5e-13
U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein. 75 5e-13
U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B... 75 5e-13
DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S. cerevi... 75 5e-13
CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein. 75 5e-13
BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S. cerevi... 75 5e-13
AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein. 75 5e-13
BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complement... 74 8e-13
BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complement... 74 8e-13
BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complement... 74 8e-13
AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complement... 74 8e-13
AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein. 74 8e-13
AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair cross-comp... 74 8e-13
D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein. 71 6e-12
D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein. 71 6e-12
CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein. 71 6e-12
BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor ... 71 6e-12
BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor ... 71 6e-12
AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor ... 71 6e-12
AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor ... 71 6e-12
AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens ... 69 2e-11
Y08837-1|CAA70065.1| 280|Homo sapiens XRCC2 protein. 48 5e-05
BC042137-1|AAH42137.1| 280|Homo sapiens X-ray repair complement... 48 5e-05
BC002723-1|AAH02723.1| 209|Homo sapiens RAD51L3 protein protein. 48 5e-05
AF520762-1|AAM55241.1| 280|Homo sapiens X-ray repair complement... 48 5e-05
AF035587-1|AAC05369.1| 280|Homo sapiens X-ray repair cross-comp... 48 5e-05
AC003109-1|AAC05802.1| 280|Homo sapiens Xrcc2 protein. 48 5e-05
BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein. 46 1e-04
BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S. cer... 44 6e-04
BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein. 44 6e-04
BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein. 44 6e-04
BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein. 44 6e-04
AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protei... 44 6e-04
AB016225-1|BAA31749.1| 216|Homo sapiens TRAD-d3 protein. 36 0.26
AL117459-1|CAB55937.1| 173|Homo sapiens hypothetical protein pr... 34 0.80
AK091080-1|BAC03578.1| 522|Homo sapiens protein ( Homo sapiens ... 33 1.8
AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein. 32 2.4
AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6). pr... 31 7.4
U21090-1|AAC50216.1| 469|Homo sapiens DNA polymerase delta smal... 30 9.8
BC000459-1|AAH00459.1| 469|Homo sapiens polymerase (DNA directe... 30 9.8
AY116646-1|AAM51148.1| 469|Homo sapiens polymerase (DNA directe... 30 9.8
AK130344-1|BAC85331.1| 139|Homo sapiens protein ( Homo sapiens ... 30 9.8
AF239710-1|AAG09763.1| 469|Homo sapiens DNA polymerase delta sm... 30 9.8
>BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 121 bits (291), Expect = 4e-27
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 11/235 (4%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQLC+QL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQLCMQLA 139
Query: 367 ASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYL----------F 516
VQIP+ G+ EA++IDT +F R ++ TA + Q I + F
Sbjct: 140 VDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDF 199
Query: 517 NEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQKRT 693
+ L ++Y + A + + FL+EH +V+L+++D I FPF+ + + RT
Sbjct: 200 TLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRT 259
Query: 694 GLLFRQMADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAWXHRCNXRVL 858
LL + +A +AV+L N+M+T+ ++W H R++
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLI 314
>AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 121 bits (291), Expect = 4e-27
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 11/235 (4%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQLC+QL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQLCMQLA 139
Query: 367 ASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYL----------F 516
VQIP+ G+ EA++IDT +F R ++ TA + Q I + F
Sbjct: 140 VDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDF 199
Query: 517 NEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQKRT 693
+ L ++Y + A + + FL+EH +V+L+++D I FPF+ + + RT
Sbjct: 200 TLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRT 259
Query: 694 GLLFRQMADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAWXHRCNXRVL 858
LL + +A +AV+L N+M+T+ ++W H R++
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLI 314
>AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein.
Length = 376
Score = 121 bits (291), Expect = 4e-27
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 11/235 (4%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQLC+QL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQLCMQLA 139
Query: 367 ASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYL----------F 516
VQIP+ G+ EA++IDT +F R ++ TA + Q I + F
Sbjct: 140 VDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDF 199
Query: 517 NEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQKRT 693
+ L ++Y + A + + FL+EH +V+L+++D I FPF+ + + RT
Sbjct: 200 TLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRT 259
Query: 694 GLLFRQMADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAWXHRCNXRVL 858
LL + +A +AV+L N+M+T+ ++W H R++
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLI 314
>D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 82.6 bits (195), Expect = 2e-15
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGGGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein.
Length = 339
Score = 82.6 bits (195), Expect = 2e-15
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGGGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 82.6 bits (195), Expect = 2e-15
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGGGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 82.6 bits (195), Expect = 2e-15
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGGGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 82.6 bits (195), Expect = 2e-15
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGGGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein.
Length = 339
Score = 82.6 bits (195), Expect = 2e-15
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGGGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 79.4 bits (187), Expect = 2e-14
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGEGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein.
Length = 328
Score = 76.6 bits (180), Expect = 1e-13
Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Frame = +1
Query: 184 SNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
S + ++ A + +T + T +LD +L + G+ G +TE++G PG+GKTQ+CL +
Sbjct: 62 SAFPVNGADLYEELKTSTAILSTGIGSLDKLL-DAGLYTGEVTEIVGGPGSGKTQVCLCM 120
Query: 364 CASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRL 543
A+ V GL LY+D+N T +R ++L A K Q E + EAL R+
Sbjct: 121 AAN-----VAHGLQQNVLYVDSNGGLTASRLLQLLQA---KTQDEE-----EQAEALQRI 167
Query: 544 HYINAFGIEKFCACMNRISVFLAEH-----PRVKLIVIDSITFPFKEGISVQKRTGL-LF 705
++AF I + + + +A+ VK++V+DS+T + Q+R GL L
Sbjct: 168 QVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALM 227
Query: 706 RQMA-DLQRIAMEGLIAVVLVNEMS 777
Q+A +L+ +A + +AVV+ N ++
Sbjct: 228 MQLARELKTLARDLGMAVVVTNHIT 252
>Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein.
Length = 328
Score = 75.8 bits (178), Expect = 2e-13
Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Frame = +1
Query: 184 SNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
S + ++ A + +T + T +LD +L + G+ G +TE++G PG+GKTQ+CL +
Sbjct: 62 SAFPVNGADLYEELKTSTAILSTGIGSLDKLL-DAGLYTGEVTEIVGGPGSGKTQVCLCM 120
Query: 364 CASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRL 543
A+ V GL LY+D+N T +R ++L A K Q E + EAL R+
Sbjct: 121 AAN-----VAHGLQQNVLYVDSNGGLTASRLLQLLQA---KTQDEE-----EQAEALRRI 167
Query: 544 HYINAFGIEKFCACMNRISVFLAEH-----PRVKLIVIDSITFPFKEGISVQKRTGL-LF 705
++AF I + + + +A+ VK++V+DS+T + Q+R GL L
Sbjct: 168 QVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALM 227
Query: 706 RQMA-DLQRIAMEGLIAVVLVNEMS 777
Q+A +L+ +A + +AVV+ N ++
Sbjct: 228 MQLARELKTLARDLGMAVVVTNHIT 252
>BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 75.8 bits (178), Expect = 2e-13
Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Frame = +1
Query: 184 SNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
S + ++ A + +T + T +LD +L + G+ G +TE++G PG+GKTQ+CL +
Sbjct: 62 SAFPVNGADLYEELKTSTAILSTGIGSLDKLL-DAGLYTGEVTEIVGGPGSGKTQVCLCM 120
Query: 364 CASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRL 543
A+ V GL LY+D+N T +R ++L A K Q E + EAL R+
Sbjct: 121 AAN-----VAHGLQQNVLYVDSNGGLTASRLLQLLQA---KTQDEE-----EQAEALRRI 167
Query: 544 HYINAFGIEKFCACMNRISVFLAEH-----PRVKLIVIDSITFPFKEGISVQKRTGL-LF 705
++AF I + + + +A+ VK++V+DS+T + Q+R GL L
Sbjct: 168 QVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALM 227
Query: 706 RQMA-DLQRIAMEGLIAVVLVNEMS 777
Q+A +L+ +A + +AVV+ N ++
Sbjct: 228 MQLARELKTLARDLGMAVVVTNHIT 252
>AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 75.8 bits (178), Expect = 2e-13
Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Frame = +1
Query: 184 SNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
S + ++ A + +T + T +LD +L + G+ G +TE++G PG+GKTQ+CL +
Sbjct: 62 SAFPVNGADLYEELKTSTAILSTGIGSLDKLL-DAGLYTGEVTEIVGGPGSGKTQVCLCM 120
Query: 364 CASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRL 543
A+ V GL LY+D+N T +R ++L A K Q E + EAL R+
Sbjct: 121 AAN-----VAHGLQQNVLYVDSNGGLTASRLLQLLQA---KTQDEE-----EQAEALRRI 167
Query: 544 HYINAFGIEKFCACMNRISVFLAEH-----PRVKLIVIDSITFPFKEGISVQKRTGL-LF 705
++AF I + + + +A+ VK++V+DS+T + Q+R GL L
Sbjct: 168 QVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALM 227
Query: 706 RQMA-DLQRIAMEGLIAVVLVNEMS 777
Q+A +L+ +A + +AVV+ N ++
Sbjct: 228 MQLARELKTLARDLGMAVVVTNHIT 252
>Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein.
Length = 350
Score = 74.5 bits (175), Expect = 5e-13
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GGV GSLTE+ G PG GKTQ C+ + +P + GL +YIDT + F+
Sbjct: 90 LDEAL-HGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFS 148
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE--H 618
R EI + P Y EE+ L ++ + + RI E
Sbjct: 149 AERLVEIAESRF-------PRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIIS 201
Query: 619 PRVKLIVIDSITFPFKEGISVQ------KRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+KL+++DS+ ++ Q +R L R+ + L+ +A E I V+L N+++T
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein.
Length = 350
Score = 74.5 bits (175), Expect = 5e-13
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GGV GSLTE+ G PG GKTQ C+ + +P + GL +YIDT + F+
Sbjct: 90 LDEAL-HGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFS 148
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE--H 618
R EI + P Y EE+ L ++ + + RI E
Sbjct: 149 AERLVEIAESRF-------PRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIIS 201
Query: 619 PRVKLIVIDSITFPFKEGISVQ------KRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+KL+++DS+ ++ Q +R L R+ + L+ +A E I V+L N+++T
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B
protein.
Length = 350
Score = 74.5 bits (175), Expect = 5e-13
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GGV GSLTE+ G PG GKTQ C+ + +P + GL +YIDT + F+
Sbjct: 90 LDEAL-HGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFS 148
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE--H 618
R EI + P Y EE+ L ++ + + RI E
Sbjct: 149 AERLVEIAESRF-------PRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIIS 201
Query: 619 PRVKLIVIDSITFPFKEGISVQ------KRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+KL+++DS+ ++ Q +R L R+ + L+ +A E I V+L N+++T
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 350
Score = 74.5 bits (175), Expect = 5e-13
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GGV GSLTE+ G PG GKTQ C+ + +P + GL +YIDT + F+
Sbjct: 90 LDEAL-HGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFS 148
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE--H 618
R EI + P Y EE+ L ++ + + RI E
Sbjct: 149 AERLVEIAESRF-------PRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIIS 201
Query: 619 PRVKLIVIDSITFPFKEGISVQ------KRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+KL+++DS+ ++ Q +R L R+ + L+ +A E I V+L N+++T
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein.
Length = 350
Score = 74.5 bits (175), Expect = 5e-13
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GGV GSLTE+ G PG GKTQ C+ + +P + GL +YIDT + F+
Sbjct: 90 LDEAL-HGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFS 148
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE--H 618
R EI + P Y EE+ L ++ + + RI E
Sbjct: 149 AERLVEIAESRF-------PRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIIS 201
Query: 619 PRVKLIVIDSITFPFKEGISVQ------KRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+KL+++DS+ ++ Q +R L R+ + L+ +A E I V+L N+++T
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 384
Score = 74.5 bits (175), Expect = 5e-13
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GGV GSLTE+ G PG GKTQ C+ + +P + GL +YIDT + F+
Sbjct: 90 LDEAL-HGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFS 148
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE--H 618
R EI + P Y EE+ L ++ + + RI E
Sbjct: 149 AERLVEIAESRF-------PRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIIS 201
Query: 619 PRVKLIVIDSITFPFKEGISVQ------KRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+KL+++DS+ ++ Q +R L R+ + L+ +A E I V+L N+++T
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein.
Length = 289
Score = 74.5 bits (175), Expect = 5e-13
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 7/178 (3%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD +L + G+ G +TE++G PG+GKTQ+CL + A+ V GL LY+D+N T
Sbjct: 50 LDKLL-DAGLYTGEVTEIVGGPGSGKTQVCLCMAAN-----VAHGLQQNVLYVDSNGGLT 103
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEH-- 618
+R ++L A K Q E + EAL R+ ++AF I + + + +A+
Sbjct: 104 ASRLLQLLQA---KTQDEE-----EQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVT 155
Query: 619 ---PRVKLIVIDSITFPFKEGISVQKRTGL-LFRQMA-DLQRIAMEGLIAVVLVNEMS 777
VK++V+DS+T + Q+R GL L Q+A +L+ +A + +AVV+ N ++
Sbjct: 156 GSSGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 213
>BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 73.7 bits (173), Expect = 8e-13
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ L +TEL G GKTQL LQLC +VQ P+ GL A A+YI T F R
Sbjct: 92 LLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPHKRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++ A + + P L + ++ + ++ C+N+ L +L+
Sbjct: 152 QQLM-AQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVLLSRGMARLV 210
Query: 637 VIDSITFPFK 666
VIDS+ PF+
Sbjct: 211 VIDSVAAPFR 220
>BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 73.7 bits (173), Expect = 8e-13
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ L +TEL G GKTQL LQLC +VQ P+ GL A A+YI T F R
Sbjct: 92 LLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPHKRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++ A + + P L + ++ + ++ C+N+ L +L+
Sbjct: 152 QQLM-AQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVLLSRGMARLV 210
Query: 637 VIDSITFPFK 666
VIDS+ PF+
Sbjct: 211 VIDSVAAPFR 220
>BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 73.7 bits (173), Expect = 8e-13
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ L +TEL G GKTQL LQLC +VQ P+ GL A A+YI T F R
Sbjct: 92 LLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPHKRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++ A + + P L + ++ + ++ C+N+ L +L+
Sbjct: 152 QQLM-AQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVLLSRGMARLV 210
Query: 637 VIDSITFPFK 666
VIDS+ PF+
Sbjct: 211 VIDSVAAPFR 220
>AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 73.7 bits (173), Expect = 8e-13
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ L +TEL G GKTQL LQLC +VQ P+ GL A A+YI T F R
Sbjct: 92 LLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPHKRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++ A + + P L + ++ + ++ C+N+ L +L+
Sbjct: 152 QQLM-AQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVLLSRGMARLV 210
Query: 637 VIDSITFPFK 666
VIDS+ PF+
Sbjct: 211 VIDSVAAPFR 220
>AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein.
Length = 346
Score = 73.7 bits (173), Expect = 8e-13
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ L +TEL G GKTQL LQLC +VQ P+ GL A A+YI T F R
Sbjct: 92 LLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPHKRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++ A + + P L + ++ + ++ C+N+ L +L+
Sbjct: 152 QQLM-AQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVLLSRGMARLV 210
Query: 637 VIDSITFPFK 666
VIDS+ PF+
Sbjct: 211 VIDSVAAPFR 220
>AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair
cross-complementing protein 3 protein.
Length = 346
Score = 73.7 bits (173), Expect = 8e-13
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ L +TEL G GKTQL LQLC +VQ P+ GL A A+YI T F R
Sbjct: 92 LLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPHKRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++ A + + P L + ++ + ++ C+N+ L +L+
Sbjct: 152 QQLM-AQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVLLSRGMARLV 210
Query: 637 VIDSITFPFK 666
VIDS+ PF+
Sbjct: 211 VIDSVAAPFR 220
>D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-12
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDAVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-12
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDPVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-12
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDAVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-12
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDAVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-12
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDAVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-12
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDAVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-12
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDAVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ16262 fis, clone IMR322008651, highly similar
to DNA REPAIR PROTEIN RAD51. ).
Length = 340
Score = 68.9 bits (161), Expect = 2e-11
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GG++ GS+TE+ G TGKTQ+C L + Q+P G +A+YIDT F P R
Sbjct: 116 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPER---- 171
Query: 466 LTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVID 645
LL + Y + + LD + Y AF + + + S + E R L+++D
Sbjct: 172 ----LL---AVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVE-SRYALLIVD 223
Query: 646 SITFPFKEGIS----VQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
S T ++ S + R L R + L R+A E +AVV+ N++
Sbjct: 224 SATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQV 270
>Y08837-1|CAA70065.1| 280|Homo sapiens XRCC2 protein.
Length = 280
Score = 48.0 bits (109), Expect = 5e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
G + E G GTGKT++ L A +PK GL E L+IDT+ +F R IL L
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 481 LKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT 654
+ + Y L R + + + HP + L+++DS++
Sbjct: 101 SQSSEEIIKY------CLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLS 152
>BC042137-1|AAH42137.1| 280|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 2 protein.
Length = 280
Score = 48.0 bits (109), Expect = 5e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
G + E G GTGKT++ L A +PK GL E L+IDT+ +F R IL L
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 481 LKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT 654
+ + Y L R + + + HP + L+++DS++
Sbjct: 101 SQSSEEIIKY------CLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLS 152
>BC002723-1|AAH02723.1| 209|Homo sapiens RAD51L3 protein protein.
Length = 209
Score = 48.0 bits (109), Expect = 5e-05
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Frame = +1
Query: 388 VLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGI 567
V GL LY+D+N T +R ++L A K Q E + EAL R+ ++AF I
Sbjct: 5 VAHGLQQNVLYVDSNGGLTASRLLQLLQA---KTQDEE-----EQAEALRRIQVVHAFDI 56
Query: 568 EKFCACMNRISVFLAEH-----PRVKLIVIDSITFPFKEGISVQKRTGL-LFRQMA-DLQ 726
+ + + +A+ VK++V+DS+T + Q+R GL L Q+A +L+
Sbjct: 57 FQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLARELK 116
Query: 727 RIAMEGLIAVVLVNEMS 777
+A + +AVV+ N ++
Sbjct: 117 TLARDLGMAVVVTNHIT 133
>AF520762-1|AAM55241.1| 280|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 2 protein.
Length = 280
Score = 48.0 bits (109), Expect = 5e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
G + E G GTGKT++ L A +PK GL E L+IDT+ +F R IL L
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 481 LKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT 654
+ + Y L R + + + HP + L+++DS++
Sbjct: 101 SQSSEEIIKY------CLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLS 152
>AF035587-1|AAC05369.1| 280|Homo sapiens X-ray repair
cross-complementing protein 2 protein.
Length = 280
Score = 48.0 bits (109), Expect = 5e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
G + E G GTGKT++ L A +PK GL E L+IDT+ +F R IL L
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 481 LKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT 654
+ + Y L R + + + HP + L+++DS++
Sbjct: 101 SQSSEEIIKY------CLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLS 152
>AC003109-1|AAC05802.1| 280|Homo sapiens Xrcc2 protein.
Length = 280
Score = 48.0 bits (109), Expect = 5e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
G + E G GTGKT++ L A +PK GL E L+IDT+ +F R IL L
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 481 LKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT 654
+ + Y L R + + + HP + L+++DS++
Sbjct: 101 SQSSEEIIKY------CLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLS 152
>BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein.
Length = 165
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDT 429
P + ++IDT
Sbjct: 146 PGAGGYPGGKIIFIDT 161
>BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 134
Score = 44.4 bits (100), Expect = 6e-04
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQL 351
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQL 134
>BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 44.4 bits (100), Expect = 6e-04
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQL 351
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQL 134
>BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 44.4 bits (100), Expect = 6e-04
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQL 351
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQL 134
>BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 44.4 bits (100), Expect = 6e-04
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQL 351
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQL 134
>AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protein
protein.
Length = 135
Score = 44.4 bits (100), Expect = 6e-04
Identities = 27/55 (49%), Positives = 32/55 (58%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQL 351
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQL 134
>AB016225-1|BAA31749.1| 216|Homo sapiens TRAD-d3 protein.
Length = 216
Score = 35.5 bits (78), Expect = 0.26
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Frame = +1
Query: 460 EILTASLLK-CQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPR---- 624
++++A L + QK SY + EAL R+ ++AF I + + + +A+
Sbjct: 30 DLVSADLEEVAQKCGLSY---KAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSG 86
Query: 625 -VKLIVIDSITFPFKEGISVQKRTGL-LFRQMA-DLQRIAMEGLIAVVLVNEMS 777
VK++V+DS+T + Q+R GL L Q+A +L+ +A + +AVV+ N ++
Sbjct: 87 TVKVVVVDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 140
>AL117459-1|CAB55937.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 33.9 bits (74), Expect = 0.80
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 520 EEEALDRLHYINAFGIEKFCACMNRISVFLAEHPR-----VKLIVIDSITFPFKEGISVQ 684
+ EAL R+ ++AF I + + + +A+ VK++V+DS+T + Q
Sbjct: 5 QAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQ 64
Query: 685 KRTG--LLFRQMADLQRIAMEGLIAVVLVNEMS 777
+R G L+ + + +L+ +A + +AVV+ N ++
Sbjct: 65 QREGLALMMQLVRELKTLARDLGMAVVVTNHIT 97
>AK091080-1|BAC03578.1| 522|Homo sapiens protein ( Homo sapiens
cDNA FLJ33761 fis, clone BRCOC2000047. ).
Length = 522
Score = 32.7 bits (71), Expect = 1.8
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +1
Query: 196 IHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASV 375
I+ EL+QK+ S+ + + N +HI+A GV GSL L G G LC S+
Sbjct: 115 INALQELYQKKLTEESLTSDAANDNHIVAE-GVSEGSLNRLKGAVSFGYG--LFHLCISM 171
Query: 376 QIPKVLSGLN 405
P +L +N
Sbjct: 172 VPPNLLKIIN 181
>AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein.
Length = 95
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 184 SNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQ 348
S + ++ A + +T + T +LD +L + G+ G +TE++G PG+GKTQ
Sbjct: 29 SAFPVNGADLYEELKTSTAILSTGIGSLDKLL-DAGLYTGEVTEIVGGPGSGKTQ 82
>AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6).
protein.
Length = 377
Score = 30.7 bits (66), Expect = 7.4
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 873 HSDGQQYPXVATMXPGVAQRAHHS-TTGQTQSCAHLIYQH 757
HS +P V T HS T G T SC+HLI+ H
Sbjct: 112 HSHACTHPHVQTHTASAYTFTTHSHTPGHTHSCSHLIHTH 151
>U21090-1|AAC50216.1| 469|Homo sapiens DNA polymerase delta small
subunit protein.
Length = 469
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 307 VSLIALHHSLEYDLSSD*MLEWRVN-RFLSATIPLQYGFYNYSYSDKFIF-SCRH*VYF 137
VS I + S+E L +LEW + R +S T P G Y + +D FIF C H VYF
Sbjct: 349 VSDIFRYSSMEDHLE---ILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPH-VYF 403
>BC000459-1|AAH00459.1| 469|Homo sapiens polymerase (DNA directed),
delta 2, regulatory subunit 50kDa protein.
Length = 469
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 307 VSLIALHHSLEYDLSSD*MLEWRVN-RFLSATIPLQYGFYNYSYSDKFIF-SCRH*VYF 137
VS I + S+E L +LEW + R +S T P G Y + +D FIF C H VYF
Sbjct: 349 VSDIFRYSSMEDHLE---ILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPH-VYF 403
>AY116646-1|AAM51148.1| 469|Homo sapiens polymerase (DNA directed),
delta 2, regulatory subunit (50kD) protein.
Length = 469
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 307 VSLIALHHSLEYDLSSD*MLEWRVN-RFLSATIPLQYGFYNYSYSDKFIF-SCRH*VYF 137
VS I + S+E L +LEW + R +S T P G Y + +D FIF C H VYF
Sbjct: 349 VSDIFRYSSMEDHLE---ILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPH-VYF 403
>AK130344-1|BAC85331.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ26834 fis, clone PRS07227. ).
Length = 139
Score = 30.3 bits (65), Expect = 9.8
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 240 LHSNI*SELRSYSSEWWSAIRLTHRVTWSSWYRKNTVVFTALCFSTNTKSFKRIECRGTV 419
LH N E + S++ S LT +T S+Y ++F +C + + R+EC G +
Sbjct: 38 LHGNRTKETKLLSTDCISTTNLTVFITCFSFY----LLFLFVCLRWSLTLWPRLECSGAI 93
Query: 420 HRH 428
H
Sbjct: 94 SAH 96
>AF239710-1|AAG09763.1| 469|Homo sapiens DNA polymerase delta small
subunit protein.
Length = 469
Score = 30.3 bits (65), Expect = 9.8
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 307 VSLIALHHSLEYDLSSD*MLEWRVN-RFLSATIPLQYGFYNYSYSDKFIF-SCRH*VYF 137
VS I + S+E L +LEW + R +S T P G Y + +D FIF C H VYF
Sbjct: 349 VSDIFRYSSMEDHLE---ILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPH-VYF 403
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,354,334
Number of Sequences: 237096
Number of extensions: 2726107
Number of successful extensions: 9296
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 8862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9272
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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