Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_F01
(901 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 311 4e-85
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 311 4e-85
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 308 4e-84
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 214 2e-64
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 216 2e-56
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 209 2e-54
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 167 8e-42
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 31 1.2
08_01_0017 + 132109-132924 31 1.6
04_04_1054 + 30437468-30437763,30438647-30438779,30439099-304391... 31 1.6
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 30 2.9
07_03_0999 - 23216665-23217419,23217626-23217956 30 2.9
06_03_0334 - 19660526-19661755 30 2.9
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848... 29 3.8
11_04_0444 + 17816207-17817436 29 5.0
08_01_0680 - 5958066-5960253,5960707-5961503 29 5.0
03_02_0053 - 5289119-5289176,5289302-5289593,5289689-5289864,529... 29 5.0
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 29 5.0
05_07_0266 - 28790917-28791307,28791565-28791714,28792201-28792673 29 6.7
03_06_0416 - 33780911-33781861 29 6.7
03_02_0637 - 10009580-10009903,10013314-10014153 29 6.7
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 29 6.7
06_01_0743 - 5534743-5534985,5535075-5535172,5535286-5535429,553... 28 8.8
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 311 bits (764), Expect = 4e-85
Identities = 144/246 (58%), Positives = 183/246 (74%)
Frame = +3
Query: 153 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 332
SG L+ P NKG+AF+ ER + GLLPP + +QE Q + ++ Y PL +YI
Sbjct: 30 SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPLQRYI 89
Query: 333 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 512
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG +
Sbjct: 90 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKI 149
Query: 513 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 692
+VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKL+LYTALGG++P CLPITI
Sbjct: 150 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITI 209
Query: 693 DVGTNTQSMLDEPLYIGLRQRRVRXPDYDELLDEFMRAVVRRYGQNCLVQFXDFGNANAF 872
DVGTN +S+L++ YIGL+QRR +Y ELL+EFM AV + YG+ LVQF DF N NAF
Sbjct: 210 DVGTNNESLLNDEFYIGLKQRRATGEEYHELLEEFMTAVKQNYGEKVLVQFEDFANHNAF 269
Query: 873 XLLEKY 890
LL KY
Sbjct: 270 DLLAKY 275
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 311 bits (764), Expect = 4e-85
Identities = 142/247 (57%), Positives = 186/247 (75%)
Frame = +3
Query: 153 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 332
SG L+ P NKG++FT +ER + GLLPP V +QE Q + ++ +++ PL +Y+
Sbjct: 33 SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYM 92
Query: 333 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 512
LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+GL+I++ +KG +
Sbjct: 93 ALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRI 152
Query: 513 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 692
++L+NWPE ++ IVVTDGERILGLGDLG GMGIPVGKLALYTALGG++P CLPITI
Sbjct: 153 LELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITI 212
Query: 693 DVGTNTQSMLDEPLYIGLRQRRVRXPDYDELLDEFMRAVVRRYGQNCLVQFXDFGNANAF 872
DVGTN + +L + YIGLRQ+R +Y +LLDEFM A+ + YGQ LVQF DF N NAF
Sbjct: 213 DVGTNNEDLLKDEFYIGLRQKRATGQEYSDLLDEFMAAIKQNYGQKVLVQFEDFANYNAF 272
Query: 873 XLLEKYR 893
LLEKYR
Sbjct: 273 TLLEKYR 279
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 308 bits (756), Expect = 4e-84
Identities = 140/246 (56%), Positives = 186/246 (75%)
Frame = +3
Query: 153 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 332
SG L+ P NKG+AF+ +ER + GLLPP V +Q+ QV+ ++ +Y PL +Y+
Sbjct: 99 SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYM 158
Query: 333 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 512
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+GL++++ DKG V
Sbjct: 159 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKV 218
Query: 513 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 692
DVL+NWPE +++ IVVTDGERILGLGDLG GMGIPVGKL+LYTALGG++P CLPITI
Sbjct: 219 LDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITI 278
Query: 693 DVGTNTQSMLDEPLYIGLRQRRVRXPDYDELLDEFMRAVVRRYGQNCLVQFXDFGNANAF 872
DVGTN + +L++ YIGLRQRR +Y EL++EFM AV + YG+ L+QF DF N NAF
Sbjct: 279 DVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAF 338
Query: 873 XLLEKY 890
LL KY
Sbjct: 339 DLLAKY 344
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 214 bits (523), Expect(2) = 2e-64
Identities = 97/172 (56%), Positives = 129/172 (75%)
Frame = +3
Query: 153 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 332
SG + L+ P NKG+AF ER+ + GLLPP + +QE Q +I +Y+ PL KY+
Sbjct: 53 SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPLQKYM 112
Query: 333 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 512
+M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+GL+I++ +KG +
Sbjct: 113 AMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGLYISLKEKGKI 172
Query: 513 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKP 668
+VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKLALYTALGG++P
Sbjct: 173 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRP 224
Score = 50.4 bits (115), Expect(2) = 2e-64
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 771 DYDELLDEFMRAVVRRYGQNCLVQFXDFGNANAFXLLEKY 890
+Y + L EFM AV + YG+ L+QF DF N NAF LL KY
Sbjct: 227 EYADFLHEFMTAVKQNYGEKVLIQFEDFANHNAFELLAKY 266
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 216 bits (528), Expect = 2e-56
Identities = 109/232 (46%), Positives = 145/232 (62%), Gaps = 10/232 (4%)
Frame = +3
Query: 156 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 314
G D L P NK AF + ER LG+ GLLPPRV + E+Q + S E+
Sbjct: 46 GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPD 105
Query: 315 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLF 485
L K+ L L DRNE L+YR + DN+ + PI+YTPTVGL C+ + ++RRPRG++
Sbjct: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
Query: 486 ITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIK 665
+ DKG + ++ NWP V IVVTDG RILGLGDLG G+GIP+GKL +Y A GI
Sbjct: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGIN 225
Query: 666 PHQCLPITIDVGTNTQSMLDEPLYIGLRQRRVRXPDYDELLDEFMRAVVRRY 821
P + LPI +DVGTN +L++ LY+GLRQ R+ +Y ++DEFM AV R+
Sbjct: 226 PQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARW 277
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 209 bits (511), Expect = 2e-54
Identities = 117/280 (41%), Positives = 163/280 (58%), Gaps = 10/280 (3%)
Frame = +3
Query: 84 YSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQL------LGIHGLL 245
+S ERDR+GL G S +D P L F E + + L +
Sbjct: 60 FSMTERDRLGLRGLLPPNVVSSQQQIDRFT-PTLKYQYKFHSEIQHIDAKGLALNYLNIS 118
Query: 246 PPRVKTQEEQVELCKLSIDRYEN--PLNKYIYLMGLLDRNEHLFYR--FVADNVAEMMPI 413
P ++ + V K + D + PL K+ L L DRNE ++Y+ + DN+ E PI
Sbjct: 119 PAICESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRNETMYYKAEVLIDNIEEHAPI 178
Query: 414 VYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLG 593
VYTPTVGL CQ + ++RRPRG++ + D+G + ++ NWP V IVVTDG RILGLG
Sbjct: 179 VYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLG 238
Query: 594 DLGACGMGIPVGKLALYTALGGIKPHQCLPITIDVGTNTQSMLDEPLYIGLRQRRVRXPD 773
DLG G+GI +GKL LY A GI P + LP+ IDVGTN + +L +PLY+GL++ R+ +
Sbjct: 239 DLGVHGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEE 298
Query: 774 YDELLDEFMRAVVRRYGQNCLVQFXDFGNANAFXLLEKYR 893
Y ++DEFM AV R+ N +VQF DF + AF LL++YR
Sbjct: 299 YVAIIDEFMEAVFARW-PNVIVQFEDFQSKWAFRLLQRYR 337
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 156 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 281
G D L P N+G F++ ER LG+ GLLPP V + ++Q++
Sbjct: 45 GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 167 bits (407), Expect = 8e-42
Identities = 70/105 (66%), Positives = 91/105 (86%)
Frame = +3
Query: 351 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 530
+R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64
Query: 531 WPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIK 665
WPE ++ IV+TDGERILGLGDLG GMGIPVGKL+LYTALGG++
Sbjct: 65 WPERSIQVIVITDGERILGLGDLGCQGMGIPVGKLSLYTALGGVR 109
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 193 PLLRPGCLRWSRPERPL--VGCPSPEPHNPIRSRSIS 89
PL PGC R R R L + PSP P + RS+S+S
Sbjct: 22 PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58
>08_01_0017 + 132109-132924
Length = 271
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1
Query: 328 YLLSGFSYLSIESLHSSTCSSC 263
YL +GFS+ S +S HSSTCS C
Sbjct: 84 YLSAGFSFASRDS-HSSTCSCC 104
>04_04_1054 +
30437468-30437763,30438647-30438779,30439099-30439159,
30439370-30439483,30439813-30439971,30440124-30440206,
30440423-30440549,30440872-30440951,30441027-30441113,
30441316-30441440,30441543-30441603,30441806-30441859,
30441946-30442023,30442449-30442554,30442655-30442803,
30442945-30443052
Length = 606
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 110 DTITFHFAIRTLPSACRLRLHPNLKGFPSN 21
D + H + + LPS+C ++ P+L FP N
Sbjct: 437 DVVNLHGSAKNLPSSCTSKMSPDLCFFPQN 466
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -1
Query: 229 PKS*RSSMVKAMPLLRPGCLRWSRPERPLVG-CPSPEPHNPIRS 101
P+S SS K +PL RP SRPE P S P P S
Sbjct: 217 PQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260
>07_03_0999 - 23216665-23217419,23217626-23217956
Length = 361
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 627 PLGCPSRMRPSRPDPEYVLRRLQQWHGRPSPAS 529
P G PS +P R P + + Q+++G+P+P S
Sbjct: 51 PFGPPSNYQPYRHPPIFQGAQQQEYYGQPTPGS 83
>06_03_0334 - 19660526-19661755
Length = 409
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 627 PLGCPSRMRPSRPDPEYVLRRLQQWHGRPSPAS 529
P G PS +P R P + + Q+++G+P+P S
Sbjct: 51 PFGPPSNYQPYRHPPIFQGAQQQEYYGQPTPGS 83
>10_05_0042 +
8481227-8481764,8482291-8482418,8483349-8483933,
8484033-8484061,8485221-8485612,8486038-8486454,
8486587-8486668,8487116-8487686
Length = 913
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 611 PACAQVAQTQNTFSVGYNNGTDVRLRPVLKNIVYMSLIVDRDEEAPWSAVHKPELLTGQA 432
P C Q+A + + G V++R + ++ L +DR +E P + +P L T A
Sbjct: 254 PMCLQLADSSVRYPAGIAEDVPVKIRDFFIPVDFVVLDMDRGKETP-LILGRPFLSTAGA 312
Query: 431 N 429
N
Sbjct: 313 N 313
>11_04_0444 + 17816207-17817436
Length = 409
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 627 PLGCPSRMRPSRPDPEYVLRRLQQWHGRPSPAS 529
P G PS +P R P + + Q ++G+P+P S
Sbjct: 51 PFGPPSNYQPYRHPPIFQGAQQQDYYGQPTPGS 83
>08_01_0680 - 5958066-5960253,5960707-5961503
Length = 994
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 75 KCTYSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGL 185
K Y E R+ IG WGSG G+ + HL + L
Sbjct: 380 KKEYWESIRNSIGTWGSGTNPTLEGMRQILHLSYKDL 416
>03_02_0053 -
5289119-5289176,5289302-5289593,5289689-5289864,
5290272-5290493,5291261-5291337
Length = 274
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 681 PITIDVGTNTQSMLDEPLYIGLRQRRVRXPDYDELLDEFMRAVVRRYG 824
P+T+ + S+L+ L GL VR PD+D F+RA+ R G
Sbjct: 151 PVTVVLKRGNNSILERSLNPGLESIGVRVPDFD-----FIRAISRGAG 193
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 627 GKLALYTALGGIKPHQCLPITIDVGTNTQSMLDE 728
GK + + GG+KP Q +PI D N + LD+
Sbjct: 241 GKCVMGSLFGGVKPKQDIPILADKYLNKELELDK 274
>05_07_0266 - 28790917-28791307,28791565-28791714,28792201-28792673
Length = 337
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -2
Query: 621 GCPSRMRPSRPDPEYVLRRLQQWHGRPSPASS*EHR----IHVPYRG 493
G R+ S DP V+ + H PSP S HR +HV RG
Sbjct: 219 GVKKRVERSEQDPSMVITTYEGQHTHPSPVSYHMHRQQGLMHVSARG 265
>03_06_0416 - 33780911-33781861
Length = 316
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 483 RGPLVGGTQARTSDRPGQPSECTQLASFQPRYPRRNGRTDAHCGPRAP 340
R P GGT +R + P P+ P P R GR PRAP
Sbjct: 17 RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63
>03_02_0637 - 10009580-10009903,10013314-10014153
Length = 387
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 713 LGVRTHVDSDGQTLMRLDASERGVE-REFAHW 621
LGV +H D G T++ +D RG++ + HW
Sbjct: 230 LGVASHSDPGGMTMLLVDDHVRGLQVKNAGHW 261
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 IARESLKIXMQSQATSGRKCTYSEMERDRIGLWGSGDGQPTS-GLSGLDHLKHP 179
I+ E + + A GRK Y R +I SG G +S SG DH+ P
Sbjct: 305 ISHEDMHQHQKVNAKGGRKGRYKSQGRGQIQQNTSGQGHVSSPATSGSDHVNKP 358
>06_01_0743 -
5534743-5534985,5535075-5535172,5535286-5535429,
5535594-5535643,5535733-5535787,5536595-5536686,
5536758-5536806,5536883-5537079,5537160-5537302,
5537625-5537777,5537848-5537896,5537974-5538071,
5538172-5538327,5538434-5538791,5538873-5538943,
5539134-5539217,5539307-5539468,5539534-5539677,
5539769-5540004,5540990-5541374
Length = 988
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 723 DEPLYIGLRQRRVRXPDYDELLDEFMRAVVRRYGQNCLVQFXD 851
DE + G R R + D +E +DE R V RY ++ +++ +
Sbjct: 140 DEDVVRGSRHRSIPMRDEEEDIDEIERQVRERYARSTHIEYGE 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,382,379
Number of Sequences: 37544
Number of extensions: 622044
Number of successful extensions: 1953
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1949
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -