Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_F01
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical...   322   3e-88
Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    28   7.9  

>AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical
           protein Y48B6A.12 protein.
          Length = 620

 Score =  322 bits (790), Expect = 3e-88
 Identities = 144/250 (57%), Positives = 188/250 (75%), Gaps = 2/250 (0%)
 Frame = +3

Query: 156 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYIY 335
           G+D LK PGLNKGMAF++ ERQ LG+HGLLPP   T+E+Q       + +  + L KYI 
Sbjct: 51  GIDLLKSPGLNKGMAFSLHERQYLGVHGLLPPAFMTEEQQAYRIITKLRQQPDNLAKYIQ 110

Query: 336 LMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKG--H 509
           L  L DRNE L+YR + DNV E+MPIVYTPTVG ACQ FG +YR P+GL+ITI+D     
Sbjct: 111 LDSLQDRNEKLYYRVLCDNVKELMPIVYTPTVGQACQHFGFIYRNPKGLYITINDNSISK 170

Query: 510 VYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPIT 689
           ++ +L NWP  +VRAIV+TDGERILGLGDLG  G+GIPVGKLALY AL GI+P  CLP+ 
Sbjct: 171 IHQILANWPTENVRAIVITDGERILGLGDLGTYGIGIPVGKLALYVALAGIRPEWCLPVI 230

Query: 690 IDVGTNTQSMLDEPLYIGLRQRRVRXPDYDELLDEFMRAVVRRYGQNCLVQFXDFGNANA 869
           +DVGT+   +L++P Y GLR++RVR P+YD L+D FM+A  +R+G++ L+QF DFGN NA
Sbjct: 231 LDVGTDNSELLNDPFYTGLRRKRVRGPEYDTLVDNFMKAATKRFGRDTLIQFEDFGNQNA 290

Query: 870 FXLLEKYRNK 899
           + LL++Y+ +
Sbjct: 291 YRLLDRYKGE 300


>Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical
           protein F22B8.1 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 316 HLTSTSILWGSWTAMSICSTVS 381
           H TS ++LW SW+A+ I +T+S
Sbjct: 200 HETSPAVLWKSWSAILILTTLS 221


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +3

Query: 243  LPPRVKTQEEQVELCKLSIDRYENPLNKYIYLMGLLDRNEH 365
            L  ++K  + ++EL +  + ++E+ L+ ++   G+L RNEH
Sbjct: 1215 LTEQIKVTQAEIELHRRDLKKHESNLSDFVMKHGIL-RNEH 1254


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +3

Query: 243  LPPRVKTQEEQVELCKLSIDRYENPLNKYIYLMGLLDRNEH 365
            L  ++K  + ++EL +  + ++E+ L+ ++   G+L RNEH
Sbjct: 1215 LTEQIKVTQAEIELHRRDLKKHESNLSDFVMKHGIL-RNEH 1254


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 328 TSILWGSWTAMSICSTVS 381
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 328 TSILWGSWTAMSICSTVS 381
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 328 TSILWGSWTAMSICSTVS 381
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 328 TSILWGSWTAMSICSTVS 381
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,181,520
Number of Sequences: 27780
Number of extensions: 476898
Number of successful extensions: 1467
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)