Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_E22
         (909 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456924-1|CAG33205.1|   98|Homo sapiens NDUFB3 protein.               58   4e-08
BC018183-1|AAH18183.1|   98|Homo sapiens NADH dehydrogenase (ubi...    58   4e-08
AF047183-1|AAC04268.1|   98|Homo sapiens NADH-ubiquinone oxidore...    58   4e-08
AF035839-1|AAC15590.1|   98|Homo sapiens NADH:ubiquinone oxidore...    58   4e-08
AC007272-1|AAX88972.1|   98|Homo sapiens unknown protein.              58   4e-08
AL079314-1|CAB45280.1|  232|Homo sapiens hypothetical protein, s...    32   3.3  
BC064903-1|AAH64903.1|  304|Homo sapiens zinc finger protein 364...    31   5.8  
BC054049-1|AAH54049.1|  304|Homo sapiens zinc finger protein 364...    31   5.8  
AL390725-6|CAI13717.1|  304|Homo sapiens zinc finger protein 364...    31   5.8  
AF542552-1|AAQ09535.1|  304|Homo sapiens zinc finger protein 364...    31   5.8  
AF419857-1|AAP97292.1|  304|Homo sapiens hypothetical protein pr...    31   5.8  
AB075855-1|BAB85561.1|  597|Homo sapiens KIAA1975 protein protein.     31   5.8  

>CR456924-1|CAG33205.1|   98|Homo sapiens NDUFB3 protein.
          Length = 98

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +2

Query: 227 VKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVIT 406
           ++G P L+ ++K LA KGL+DPW RNEAWRY  GF  +       FF+GF  G    V+ 
Sbjct: 24  IEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF-AKSVSFSDVFFKGFKWGFAAFVVA 81

Query: 407 VALDKFM 427
           V  + ++
Sbjct: 82  VGAEYYL 88


>BC018183-1|AAH18183.1|   98|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 3, 12kDa protein.
          Length = 98

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +2

Query: 227 VKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVIT 406
           ++G P L+ ++K LA KGL+DPW RNEAWRY  GF  +       FF+GF  G    V+ 
Sbjct: 24  IEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF-AKSVSFSDVFFKGFKWGFAAFVVA 81

Query: 407 VALDKFM 427
           V  + ++
Sbjct: 82  VGAEYYL 88


>AF047183-1|AAC04268.1|   98|Homo sapiens NADH-ubiquinone
           oxidoreductase subunit CI-B12 protein.
          Length = 98

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +2

Query: 227 VKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVIT 406
           ++G P L+ ++K LA KGL+DPW RNEAWRY  GF  +       FF+GF  G    V+ 
Sbjct: 24  IEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF-AKSVSFSDVFFKGFKWGFAAFVVA 81

Query: 407 VALDKFM 427
           V  + ++
Sbjct: 82  VGAEYYL 88


>AF035839-1|AAC15590.1|   98|Homo sapiens NADH:ubiquinone
           oxidoreductase B12 subunit protein.
          Length = 98

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +2

Query: 227 VKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVIT 406
           ++G P L+ ++K LA KGL+DPW RNEAWRY  GF  +       FF+GF  G    V+ 
Sbjct: 24  IEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF-AKSVSFSDVFFKGFKWGFAAFVVA 81

Query: 407 VALDKFM 427
           V  + ++
Sbjct: 82  VGAEYYL 88


>AC007272-1|AAX88972.1|   98|Homo sapiens unknown protein.
          Length = 98

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +2

Query: 227 VKGIPQLDELEKALAVKGLKDPWIRNEAWRYHPGFGTRWQRARKFFFRGFPIGLGLTVIT 406
           ++G P L+ ++K LA KGL+DPW RNEAWRY  GF  +       FF+GF  G    V+ 
Sbjct: 24  IEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF-AKSVSFSDVFFKGFKWGFAAFVVA 81

Query: 407 VALDKFM 427
           V  + ++
Sbjct: 82  VGAEYYL 88


>AL079314-1|CAB45280.1|  232|Homo sapiens hypothetical protein,
           similar to (U06944) PRAJA1 [Mus musculus] protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 406 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 284
           C  C    NGE S  + S S  ASA +R  + S ++D W F
Sbjct: 193 CPVCRKSLNGEDSTRQ-SQSTEASASNRFSNDSQLNDRWTF 232


>BC064903-1|AAH64903.1|  304|Homo sapiens zinc finger protein 364
           protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 406 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 284
           C  C    NGE S  + S S  ASA +R  + S + D W F
Sbjct: 265 CPVCRKSLNGEDSTRQ-SQSTEASASNRFSNDSQLHDRWTF 304


>BC054049-1|AAH54049.1|  304|Homo sapiens zinc finger protein 364
           protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 406 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 284
           C  C    NGE S  + S S  ASA +R  + S + D W F
Sbjct: 265 CPVCRKSLNGEDSTRQ-SQSTEASASNRFSNDSQLHDRWTF 304


>AL390725-6|CAI13717.1|  304|Homo sapiens zinc finger protein 364
           protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 406 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 284
           C  C    NGE S  + S S  ASA +R  + S + D W F
Sbjct: 265 CPVCRKSLNGEDSTRQ-SQSTEASASNRFSNDSQLHDRWTF 304


>AF542552-1|AAQ09535.1|  304|Homo sapiens zinc finger protein 364
           protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 406 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 284
           C  C    NGE S  + S S  ASA +R  + S + D W F
Sbjct: 265 CPVCRKSLNGEDSTRQ-SQSTEASASNRFSNDSQLHDRWTF 304


>AF419857-1|AAP97292.1|  304|Homo sapiens hypothetical protein
           protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 406 CDYCESQSNGESSKEEFSGSLPASAKSRVISPSLISDPWIF 284
           C  C    NGE S  + S S  ASA +R  + S + D W F
Sbjct: 265 CPVCRKSLNGEDSTRQ-SQSTEASASNRFSNDSQLHDRWTF 304


>AB075855-1|BAB85561.1|  597|Homo sapiens KIAA1975 protein protein.
          Length = 597

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -3

Query: 535 QSISNSILFQLQ*CKQFTTKSMLSLVPVTMPMFTPSHKFIQSHCDYCESQS 383
           Q+I + IL  LQ C+   +KS L+     M + +  +    SHC  CE+Q+
Sbjct: 347 QAIQSQILASLQSCESSKSKSQLTSQSEAMALQSIQNMRGNSHCVDCETQN 397


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,661,985
Number of Sequences: 237096
Number of extensions: 2154648
Number of successful extensions: 3097
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3097
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)