Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_E21
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical pr... 325 2e-89
U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 31 1.2
AF016668-6|AAB66090.1| 275|Caenorhabditis elegans Hypothetical ... 30 2.0
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 29 6.2
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 29 6.2
U23523-3|AAC46558.2| 152|Caenorhabditis elegans Hypothetical pr... 29 6.2
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 29 6.2
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 29 6.2
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 29 6.2
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 29 6.2
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 29 6.2
>U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical
protein K10C2.4 protein.
Length = 418
Score = 325 bits (799), Expect = 2e-89
Identities = 149/250 (59%), Positives = 186/250 (74%)
Frame = +1
Query: 91 MKSFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWILDLNIISHLFDGPLLKGKQ 270
MKSF+ +SDFPI+NLPYGVF++ ++ +HIGVAIG+ IL+L I++LFDGP LK Q
Sbjct: 1 MKSFVSVPQNSDFPIQNLPYGVFSTKADSSRHIGVAIGDQILNLAEIANLFDGPQLKAHQ 60
Query: 271 NVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQRDVQMHVPV 450
+VFK+ LNAFMAL +P W+EAR +Q+LL L++NA LR +A V Q D MH+P
Sbjct: 61 DVFKQSTLNAFMALPRPAWLEARARIQQLLSEDCAVLRDNAHLRSRALVAQSDATMHLPA 120
Query: 451 EVGDYTDFYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQ 630
++GDYTDFYSS+ HATNVGIMFRGKE AL NWK LPVGYHGR+SSIV+SGT + RP GQ
Sbjct: 121 QIGDYTDFYSSIHHATNVGIMFRGKENALMPNWKWLPVGYHGRASSIVVSGTDLKRPVGQ 180
Query: 631 TLPVEGAAPHFGPCRLMDFELEVGAFVGGPPTQLGXXVCXKDXENKIFGFVLLNDWSARD 810
T + P FGP +LMDFELE+ FVGGP +LG V + E++IFG VL+NDWSARD
Sbjct: 181 TKAPDAEVPSFGPSKLMDFELEMAFFVGGPENELGTRVPIEKAEDRIFGVVLMNDWSARD 240
Query: 811 IXKWGVLPLG 840
I W +PLG
Sbjct: 241 IQAWEYVPLG 250
>U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical
protein T10E9.3 protein.
Length = 583
Score = 34.3 bits (75), Expect = 0.12
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Frame = +1
Query: 67 LVSTS*RKMKSFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWILDLNIISHLFD 246
+ ST K+ IE+ D D + + VF + K + + +GE + DLN+I +
Sbjct: 197 ICSTGGEDQKNRIEWKVDGDL----IYFSVFQNAKKGRWWTAIGVGESMNDLNMILLFAE 252
Query: 247 GPLLKGKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQR 426
LK KQ +FK E L + E E + L V++ + + +K F+ +
Sbjct: 253 NGRLK-KQGIFKTE--GKMQPLEVEY--EGIEVKKDLAIVNNGKANFDVSVEKKFFLDRA 307
Query: 427 DVQ----MHVPVEVGDY 465
D Q M V + G Y
Sbjct: 308 DEQGCFTMQVAILAGQY 324
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 340 ETLQKLLDVSSPALQNNA-ELREKAFVKQRDVQMHVPVEVGDYTDFYSSLQHATNVGIMF 516
E ++KL +V A NN EK ++ D ++ +GD T+ S+++ VG
Sbjct: 117 ELIKKLKEVRQSAAANNEISPMEKRALEWEDYRLRSEF-IGDVTNLTGSVEYFNAVGNFQ 175
Query: 517 RGKEAALFENWKHLPVGYHGRSSSIVIS 600
R ++LFE+ G++ +SI+ S
Sbjct: 176 RDFNSSLFESTAEKFDGFNEHITSILKS 203
>AF016668-6|AAB66090.1| 275|Caenorhabditis elegans Hypothetical
protein F36H9.2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -3
Query: 446 GTCICTSLCFTKAFSRSSALFCNAGLETSSNFCKVSLASIQ*GLVSAINAFNFSSLNTFC 267
G C TS C T S + + L T ++ + + GLVS + + + +++TF
Sbjct: 32 GFCETTSYCMTSWVSINGQITAQDCLTTRTDLSDRQCQTNRKGLVSCVCSTDMCNVDTFS 91
Query: 266 LP----LSSGPSNKC 234
+P L++ P+ KC
Sbjct: 92 IPTDIVLTAPPTIKC 106
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = -3
Query: 827 TPHXWMSRALQSFKSTKP-KILFSXSLXQTXSPSCVGGPPTNAPT--------SSSKSIS 675
TP+ + + F ST P K LF + + +PS G T+ P+ +S+ + S
Sbjct: 18 TPNAPTTSSGTLFGSTTPSKPLFGSTAQASSTPSLFGTTNTSTPSGGLFGKTGTSTTTTS 77
Query: 674 LQGPKWGAAPSTGKVCP 624
G +GAAP+T P
Sbjct: 78 TAGTLFGAAPTTSTATP 94
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = -3
Query: 827 TPHXWMSRALQSFKSTKP-KILFSXSLXQTXSPSCVGGPPTNAPT--------SSSKSIS 675
TP+ + + F ST P K LF + + +PS G T+ P+ +S+ + S
Sbjct: 18 TPNAPTTSSGTLFGSTTPSKPLFGSTAQASSTPSLFGTTNTSTPSGGLFGKTGTSTTTTS 77
Query: 674 LQGPKWGAAPSTGKVCP 624
G +GAAP+T P
Sbjct: 78 TAGTLFGAAPTTSTATP 94
>U23523-3|AAC46558.2| 152|Caenorhabditis elegans Hypothetical
protein F53A9.3 protein.
Length = 152
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 514 FRGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQTLPVEGAAPHF 663
FR +E ++ WK + Y+ +S IS + R L VEG PHF
Sbjct: 15 FRDEEKGIYAQWK-IKGFYYRKSGLPKISIKGVARVRYSQLEVEGKLPHF 63
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 746 APRTPKTKFLVSCF*TTGVXVTSXSGEYYLSGPSPGQKPXSTIS 877
AP TP F CF + + V S S E L+ P+P S+ S
Sbjct: 311 APSTPILNFTNPCFNSPIIPVASSSREVILTLPTPAASSSSSTS 354
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 746 APRTPKTKFLVSCF*TTGVXVTSXSGEYYLSGPSPGQKPXSTIS 877
AP TP F CF + + V S S E L+ P+P S+ S
Sbjct: 415 APSTPILNFTNPCFNSPIIPVASSSREVILTLPTPAASSSSSTS 458
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 746 APRTPKTKFLVSCF*TTGVXVTSXSGEYYLSGPSPGQKPXSTIS 877
AP TP F CF + + V S S E L+ P+P S+ S
Sbjct: 466 APSTPILNFTNPCFNSPIIPVASSSREVILTLPTPAASSSSSTS 509
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 LKGKQNVFKEEKLNAFMALTKPH-WIEARETLQKLLDVSSPALQNNAELREKAFVKQRDV 432
L+ ++ EK N + + K H W E RE + L+DV S L+ E+ E+ +++
Sbjct: 278 LEAREICINSEK-NVPVIIEKIHQWTEVREVIIDLIDVESENLRKLKEMEEQLDFMMKEM 336
Query: 433 Q 435
+
Sbjct: 337 E 337
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 746 APRTPKTKFLVSCF*TTGVXVTSXSGEYYLSGPSPGQKPXSTIS 877
AP TP F CF + + V S S E L+ P+P S+ S
Sbjct: 466 APSTPILNFTNPCFNSPIIPVASSSREVILTLPTPAASSSSSTS 509
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,540,582
Number of Sequences: 27780
Number of extensions: 533755
Number of successful extensions: 1456
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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