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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_E20
         (890 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    45   1e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    40   5e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    38   0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    37   0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    33   0.072
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1...    27   0.20 
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    29   0.89 
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    28   1.6  
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2...    28   2.1  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   3.6  
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S...    27   4.7  
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces...    27   4.7  

>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 22/55 (40%), Positives = 22/55 (40%)
 Frame = +3

Query: 549 KXPPPPPXXGXXKKXXPPPPPPPXXXPXXXWGGXXXPPPPPXXXXXXXXXPXPPP 713
           K PPPPP         P P P P   P    GG   PPPPP         P PPP
Sbjct: 730 KSPPPPPPAVIV--PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782



 Score = 41.1 bits (92), Expect = 2e-04
 Identities = 23/62 (37%), Positives = 23/62 (37%)
 Frame = +1

Query: 535 LXKKXXPPPPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPPPXXXXGXXXXXPXPPX 714
           L  K  PPPPP          P P PPP   P   G    PPPP     G     P PP 
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPA--PIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784

Query: 715 XS 720
            S
Sbjct: 785 VS 786



 Score = 37.5 bits (83), Expect = 0.003
 Identities = 19/52 (36%), Positives = 19/52 (36%)
 Frame = +3

Query: 597 PPPPPPPXXXPXXXWGGXXXPPPPPXXXXXXXXXPXPPPXXGXXXXXXXPPP 752
           PPPPPP    P         PPP P         P PPP  G       PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP----IMGGPPPPPPPPGVAGAGPPPPP 779



 Score = 35.5 bits (78), Expect = 0.010
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = +1

Query: 601 PPPPPPXXXPXXXGGGXXPPPPPXXXXGXXXXXPXPPXXSG 723
           PPPPPP            P PPP    G     P PP  +G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772



 Score = 34.7 bits (76), Expect = 0.018
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = +1

Query: 553 PPPPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPP 666
           PPPPP   G      PPPPPPP       G     P P
Sbjct: 761 PPPPPPPPG-VAGAGPPPPPPPPPAVSAGGSRYYAPAP 797



 Score = 34.3 bits (75), Expect = 0.024
 Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 554 PPPPPXXXXXXKXXPPPPPPPXXXXPXXXG-GXXXPPPPPXXXXGXG 691
           P PPP         PPPPPPP    P   G G   PPPPP      G
Sbjct: 750 PVPPPAPIMGG---PPPPPPP----PGVAGAGPPPPPPPPPAVSAGG 789



 Score = 33.5 bits (73), Expect = 0.041
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +2

Query: 554 PPPPPXXXXXXKXXPPPPPPPXXXXPXXXGGXXXPPPPPXXXXGXG 691
           P P P          PPPPPP    P   G    PPPPP      G
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPP---PPGVAGAGPPPPPPPPPAVSAG 788


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 29/101 (28%), Positives = 29/101 (28%), Gaps = 15/101 (14%)
 Frame = +3

Query: 495 PPXGGXXXXXXXFFXKKXKXPPPPPXX----------GXXKKXXPPPPPPP-----XXXP 629
           PP             KK   PPPPP            G      PPPPPPP        P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352

Query: 630 XXXWGGXXXPPPPPXXXXXXXXXPXPPPXXGXXXXXXXPPP 752
               G    PPPPP         P P            PPP
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393



 Score = 36.7 bits (81), Expect = 0.004
 Identities = 26/93 (27%), Positives = 26/93 (27%), Gaps = 8/93 (8%)
 Frame = +3

Query: 555 PPPPPXXGXXKKXXP--------PPPPPPXXXPXXXWGGXXXPPPPPXXXXXXXXXPXPP 710
           PPPPP         P        PPPPPP   P          PPP          P PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP-----STGRQPPPLSSSRAVSNPPAPP 392

Query: 711 PXXGXXXXXXXPPPGGGXXXXXXXXXXPXRXPP 809
           P          PP G            P   PP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425



 Score = 29.9 bits (64), Expect = 0.51
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = +1

Query: 553 PPPPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPPPXXXXGXXXXXPXP 708
           P  PP         PP PP  P   P   G    PP PP          P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484



 Score = 28.3 bits (60), Expect = 1.6
 Identities = 16/53 (30%), Positives = 16/53 (30%)
 Frame = +1

Query: 553 PPPPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPPPXXXXGXXXXXPXPP 711
           P  PP   G       PP P P   P        P  PP    G     P PP
Sbjct: 401 PALPPL--GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451



 Score = 26.6 bits (56), Expect = 4.7
 Identities = 19/87 (21%), Positives = 20/87 (22%)
 Frame = +3

Query: 492 PPPXGGXXXXXXXFFXKKXKXPPPPPXXGXXKKXXPPPPPPPXXXPXXXWGGXXXPPPPP 671
           PP   G             +   PP           PP  PP   P    G    PP PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451

Query: 672 XXXXXXXXXPXPPPXXGXXXXXXXPPP 752
                       P           PPP
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPAAPAPPP 478



 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/53 (26%), Positives = 14/53 (26%)
 Frame = +2

Query: 554 PPPPPXXXXXXKXXPPPPPPPXXXXPXXXGGXXXPPPPPXXXXGXGXXPXXPP 712
           PP  P          PP PP     P    G    PP P         P   P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484



 Score = 25.8 bits (54), Expect = 8.3
 Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
 Frame = +1

Query: 553 PPPPPXXXGKXKXXPPPPPPP--PXXXPXXXGGGXXPPPPP 669
           PP PP   G     P  PP P  P            PP PP
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294



 Score = 23.0 bits (47), Expect(2) = 4.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +1

Query: 595 PPPPPPPPXXXPXXXGGGXXPPPPP 669
           PP PPP               PPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPP 314



 Score = 21.8 bits (44), Expect(2) = 4.7
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +1

Query: 562 PPXXXGKXKXXPPPPPPPP 618
           PP          PPP PPP
Sbjct: 241 PPERVPSLSAPAPPPIPPP 259


>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 273

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 23/68 (33%), Positives = 23/68 (33%)
 Frame = -2

Query: 751 GGGXXXXXXXPXXGGGXGXXXXXXXXXGGGGGXXXPPXXXXGXXXGGGGGGGXXFXXXPX 572
           GGG       P   GG G         GG GG    P    G   G GGG G        
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253

Query: 571 XGGGGGXF 548
            GGG G F
Sbjct: 254 FGGGPGGF 261



 Score = 33.1 bits (72), Expect = 0.055
 Identities = 23/68 (33%), Positives = 23/68 (33%)
 Frame = -2

Query: 760 PPPGGGXXXXXXXPXXGGGXGXXXXXXXXXGGGGGXXXPPXXXXGXXXGGGGGGGXXFXX 581
           PPPG G           GG G         GGG G         G   GG GGG   F  
Sbjct: 200 PPPGPGGFGGFGG---FGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGG 256

Query: 580 XPXXGGGG 557
            P   GGG
Sbjct: 257 GPGGFGGG 264



 Score = 29.1 bits (62), Expect = 0.89
 Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -2

Query: 670 GGGGGXXXPPXXXXG-XXXGGGGGGGXXFXXXPXXGGGGGXF 548
           G GGG   PP    G    GG GG G         GGG G F
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGF 233



 Score = 27.1 bits (57), Expect = 3.6
 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
 Frame = -3

Query: 669 GGGGGXXXPPXXXGXXXXGGGGG----GGXXFXFXXXXGGGGG 553
           GG GG    P   G    G GGG    GG    F    GG GG
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +3

Query: 555 PPPPPXXGXXKKXXPPPPPPP 617
           PPPPP  G      PPPPPPP
Sbjct: 10  PPPPPPPGFEPPSQPPPPPPP 30



 Score = 35.9 bits (79), Expect = 0.008
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 553 PPPPPXXXGKXKXXPPPPPPPP 618
           PPPPP   G      PPPPPPP
Sbjct: 9   PPPPPPPPGFEPPSQPPPPPPP 30



 Score = 34.3 bits (75), Expect = 0.024
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +1

Query: 595 PPPPPPPPXXXPXXXGGGXXPPPPP 669
           PPPPPPPP   P        PPPPP
Sbjct: 9   PPPPPPPPGFEPP----SQPPPPPP 29



 Score = 27.9 bits (59), Expect = 2.1
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 595 PPPPPPPPXXXPXXXGGGXXPPPPP 669
           P  PPPPP            PPPPP
Sbjct: 6   PGNPPPPPPPPGFEPPSQPPPPPPP 30



 Score = 27.1 bits (57), Expect = 3.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 657 PPPPPXXXXXXXXXPXPPPXXG 722
           PPPPP         P PPP  G
Sbjct: 10  PPPPPPPGFEPPSQPPPPPPPG 31



 Score = 26.6 bits (56), Expect = 4.7
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +3

Query: 642 GGXXXPPPPPXXXXXXXXXPXPPP 713
           G    PPPPP         P PPP
Sbjct: 7   GNPPPPPPPPGFEPPSQPPPPPPP 30


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 32.7 bits (71), Expect = 0.072
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = +1

Query: 595  PPPPP---PPPXXXPXXXGGGXXPPPPP 669
            PPPPP   PPP   P    G    PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734



 Score = 30.7 bits (66), Expect = 0.29
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = +1

Query: 553  PPPPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPPP 669
            PP  P      +   P PPPPP   P        P  PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728



 Score = 29.5 bits (63), Expect = 0.67
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +1

Query: 553  PPPPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPP 666
            PPPPP         PP P  PP   P        P  P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744


>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1841

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 595 PPPPPPPP 618
           PPPPPPPP
Sbjct: 945 PPPPPPPP 952



 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 595 PPPPPPPP 618
           PPPPPPPP
Sbjct: 946 PPPPPPPP 953



 Score = 26.2 bits (55), Expect(2) = 0.20
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 598  PPPPPPPXXXPXXXGGGXXPP 660
            PPPPPPP       GG    P
Sbjct: 945  PPPPPPPPPLVSAAGGKFVSP 965



 Score = 23.4 bits (48), Expect(2) = 0.20
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 595 PPPPPPPP 618
           P PPPPPP
Sbjct: 905 PTPPPPPP 912



 Score = 23.0 bits (47), Expect(2) = 2.6
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +1

Query: 601  PPPPPPXXXPXXXGGGXXPPP 663
            PPPPPP        GG    P
Sbjct: 945  PPPPPPPPPLVSAAGGKFVSP 965



 Score = 22.6 bits (46), Expect(2) = 2.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 595 PPPPPPPP 618
           PPPPPP P
Sbjct: 907 PPPPPPLP 914


>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 29.1 bits (62), Expect = 0.89
 Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 10/68 (14%)
 Frame = +2

Query: 539 KKXKXPPPPPXXXXXXKXXPPP----------PPPPXXXXPXXXGGXXXPPPPPXXXXGX 688
           K  +  PPPP      +  PPP          PPPP    P    G   PPPP     G 
Sbjct: 215 KPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP----GEHMPPPPMHHEPGE 270

Query: 689 GXXPXXPP 712
              P  PP
Sbjct: 271 HMPP--PP 276



 Score = 28.7 bits (61), Expect = 1.2
 Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 10/62 (16%)
 Frame = +2

Query: 557 PPPPXXXXXXKXXPPP----------PPPPXXXXPXXXGGXXXPPPPPXXXXGXGXXPXX 706
           PPPP      +  PPP          PPPP    P    G   PPPP     G    P  
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEP----GEHMPPPPMHHEPGEHMPP-- 261

Query: 707 PP 712
           PP
Sbjct: 262 PP 263



 Score = 28.7 bits (61), Expect = 1.2
 Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 10/62 (16%)
 Frame = +2

Query: 557 PPPPXXXXXXKXXPPP----------PPPPXXXXPXXXGGXXXPPPPPXXXXGXGXXPXX 706
           PPPP      +  PPP          PPPP    P    G   PPPP     G    P  
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP----GEHMPPPPMHHEPGEHMPP-- 326

Query: 707 PP 712
           PP
Sbjct: 327 PP 328


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
 Frame = +1

Query: 559 PPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPPP--XXXXGXXXXXPXPP 711
           PP     +    P PPPPPP   P         P P       G     P PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276



 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 595 PPPPPPPP 618
           PPPPPPPP
Sbjct: 189 PPPPPPPP 196



 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 595 PPPPPPPP 618
           PPPPPPPP
Sbjct: 190 PPPPPPPP 197


>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1217

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 559  PPPXXXGKXKXXPPPPPPPP 618
            P      K    PPPPPPPP
Sbjct: 1083 PVANNVSKPSAVPPPPPPPP 1102


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 12/37 (32%), Positives = 12/37 (32%)
 Frame = +1

Query: 556  PPPPXXXGKXKXXPPPPPPPPXXXPXXXGGGXXPPPP 666
            PP P         PPP P P    P        PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086



 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 4/42 (9%)
 Frame = +1

Query: 553  PPPPPXXXGKXKXXP----PPPPPPPXXXPXXXGGGXXPPPP 666
            PP PP         P    PP PPP    P        PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230



 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +2

Query: 599  PPPPPPXXXXPXXXGGXXXPPPPP 670
            PP PPP    P        PP PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPP 1212


>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
           Cap1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 551

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/33 (33%), Positives = 11/33 (33%)
 Frame = +3

Query: 567 PXXGXXKKXXPPPPPPPXXXPXXXWGGXXXPPP 665
           P  G       PPPPPP       W     P P
Sbjct: 295 PSSGDSANGGLPPPPPPPPPSNDFWKDSNEPAP 327


>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 713

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 595 PPPPPPPP 618
           PPPPPPPP
Sbjct: 370 PPPPPPPP 377


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.317    0.155    0.567 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,254,575
Number of Sequences: 5004
Number of extensions: 47314
Number of successful extensions: 607
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)

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