Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_E15
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0525 + 3904388-3904390,3904485-3904645,3905347-3905394,390...    35   0.070
03_06_0283 - 32832572-32832677,32833343-32833531,32833582-328337...    35   0.070
07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582           30   2.6  
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449...    30   2.6  

>07_01_0525 +
           3904388-3904390,3904485-3904645,3905347-3905394,
           3905714-3905902,3906872-3906977
          Length = 168

 Score = 35.1 bits (77), Expect = 0.070
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 102 MSLVIPDKIQHILRIMNTNIDGNPXV 179
           MSL+  +  QHILR++NTN+DG   +
Sbjct: 1   MSLIAGEDFQHILRLLNTNVDGKQKI 26


>03_06_0283 -
           32832572-32832677,32833343-32833531,32833582-32833796,
           32833900-32833902
          Length = 170

 Score = 35.1 bits (77), Expect = 0.070
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 102 MSLVIPDKIQHILRIMNTNIDGNPXV 179
           MSL+  +  QHILR++NTN+DG   +
Sbjct: 1   MSLIAGEDFQHILRLLNTNVDGKQKI 26


>07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582
          Length = 148

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 120 DKIQHILRIMNTNIDGNPXV 179
           +  QHILR++NTN+DG   +
Sbjct: 3   EDFQHILRLLNTNVDGKQKI 22


>01_01_0605 +
           4497308-4497472,4497719-4497904,4498898-4499003,
           4499062-4499216,4499341-4499424,4499498-4499589,
           4499729-4499837,4499944-4500030,4500153-4500245,
           4501144-4501341,4501481-4501632,4501724-4501874,
           4501975-4502073,4502159-4502326,4502624-4502702,
           4502870-4503000
          Length = 684

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -3

Query: 191 SXQXNXGVAIDVXIHDTKNMLNFVWNDQRHFG*VSNQRSQTQXQGKTKFL 42
           S Q   G+ I+V +    NML F+   ++ F       SQTQ QGKT  L
Sbjct: 142 SGQNWGGIDINVTLSIVGNMLTFMVGSKQAFEVSLADVSQTQMQGKTDVL 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,354,747
Number of Sequences: 37544
Number of extensions: 284097
Number of successful extensions: 378
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)