Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_E15
(838 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18 pro... 44 7e-04
BX248408-4|CAM26259.1| 34|Homo sapiens ribosomal protein S18 p... 44 7e-04
BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18 p... 44 7e-04
BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18 p... 44 7e-04
BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18 p... 44 7e-04
AY536376-1|AAT66049.1| 34|Homo sapiens rhabdomyosarcoma antige... 44 7e-04
AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18 ... 44 7e-04
AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18 p... 44 7e-04
AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18 ... 44 7e-04
AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18 ... 44 7e-04
AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18 ... 44 7e-04
AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18 p... 44 7e-04
>X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>BX248408-4|CAM26259.1| 34|Homo sapiens ribosomal protein S18
protein.
Length = 34
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>AY536376-1|AAT66049.1| 34|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.21 protein.
Length = 34
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
>AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 102 MSLVIPDKIQHILRIMNTNIDG 167
MSLVIP+K QHILR++NTNIDG
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDG 22
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,000,378
Number of Sequences: 237096
Number of extensions: 1668819
Number of successful extensions: 2442
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2250
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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