Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_E15
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...    46   5e-05
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...    46   5e-05
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...    46   5e-05
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...    46   5e-05
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...    43   5e-04

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 102 MSLVIPDKIQHILRIMNTNIDGNPXVXL 185
           MSLVIP+K QHILRIMNTNIDG   V +
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGI 28


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 102 MSLVIPDKIQHILRIMNTNIDGNPXVXL 185
           MSLVIP+K QHILRIMNTNIDG   V +
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGI 28


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 102 MSLVIPDKIQHILRIMNTNIDGNPXVXL 185
           MSLVIP+K QHILRIMNTNIDG   V +
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGI 28


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 102 MSLVIPDKIQHILRIMNTNIDGNPXVXL 185
           MSLVIP+K QHILRIMNTNIDG   V +
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGI 28


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 102 MSLVIPDKIQHILRIMNTNIDGNPXVXL 185
           MSLVIP+K Q ILRIMNTNIDG   V +
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGI 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,995,924
Number of Sequences: 53049
Number of extensions: 465857
Number of successful extensions: 1072
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)