Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_E13
(983 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 47 2e-05
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 47 2e-05
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 47 2e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.005
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.005
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.006
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 36 0.058
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 36 0.058
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 34 0.18
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.18
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 33 0.31
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 33 0.31
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.31
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.41
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 32 0.72
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 0.95
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.95
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 0.95
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.95
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.95
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 31 0.95
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.3
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.3
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.3
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 31 1.3
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.3
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 1.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 3.8
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 3.8
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 29 3.8
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 29 5.1
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.1
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.1
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 5.1
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 5.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 5.1
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 5.1
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 29 5.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 29 6.7
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 6.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.7
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 6.7
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 8.9
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 8.9
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 8.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/66 (36%), Positives = 26/66 (39%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPX 666
PP G PP GG GPPP P P PP++ P P P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPPP 772
Query: 667 PPXPGG 684
PP P G
Sbjct: 773 PPPPPG 778
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXP----PLASXPXTXLPXPRGXXSPXPPXPGGA*P 693
PP G GPPP P P P P P LP G P PP PGG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXS-- 660
PP G PP GG G PP P P PP P P P G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP----PPGGCPPPPPPPPPGGFKGGP 784
Query: 661 PXPPXPG 681
P PP PG
Sbjct: 785 PPPPPPG 791
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/87 (26%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Frame = +1
Query: 604 PPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF-XGPXGXXXXPG 780
PP+ P P P PP P G P PPG P GP PG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 781 RPXPXRXFPKNXXXXXXXXXAPXGGVF 861
P P P G+F
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/66 (36%), Positives = 26/66 (39%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPX 666
PP G PP GG GPPP P P PP++ P P P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPPP 772
Query: 667 PPXPGG 684
PP P G
Sbjct: 773 PPPPPG 778
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXP----PLASXPXTXLPXPRGXXSPXPPXPGGA*P 693
PP G GPPP P P P P P LP G P PP PGG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXS-- 660
PP G PP GG G PP P P PP P P P G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP----PPGGCPPPPPPPPPGGFKGGP 784
Query: 661 PXPPXPG 681
P PP PG
Sbjct: 785 PPPPPPG 791
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/87 (26%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Frame = +1
Query: 604 PPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF-XGPXGXXXXPG 780
PP+ P P P PP P G P PPG P GP PG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 781 RPXPXRXFPKNXXXXXXXXXAPXGGVF 861
P P P G+F
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/66 (36%), Positives = 26/66 (39%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPX 666
PP G PP GG GPPP P P PP++ P P P G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPPP 355
Query: 667 PPXPGG 684
PP P G
Sbjct: 356 PPPPPG 361
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXP----PLASXPXTXLPXPRGXXSPXPPXPGGA*P 693
PP G GPPP P P P P P LP G P PP PGG P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXS-- 660
PP G PP GG G PP P P PP P P P G
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP----PPGGCPPPPPPPPPGGFKGGP 367
Query: 661 PXPPXPG 681
P PP PG
Sbjct: 368 PPPPPPG 374
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/87 (26%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Frame = +1
Query: 604 PPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF-XGPXGXXXXPG 780
PP+ P P P PP P G P PPG P GP PG
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 781 RPXPXRXFPKNXXXXXXXXXAPXGGVF 861
P P P G+F
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Frame = +1
Query: 571 PPPXPXPLXXXPPLASXPX-TXLPXP---RGXXSPXPPXPGGA*PRYQXFXXWGAPPGAX 738
PPP P PP+ P T P P G P PP P G P G PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP--GMPPPPP 321
Query: 739 XPFXGPXGXXXXPGRPXPXRXFP 807
GP G P P P +P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYP 344
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P PP P P G G PG P P G PGG P
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Query: 710 KKXWYRG*APPG 675
Y A PG
Sbjct: 351 PPPRYPS-AGPG 361
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +1
Query: 571 PPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRY-QXFXXWGAPPGAXXPF 747
PPP P P + P P R PP P PRY PP P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP----PRYPSAGPGMYPPPPPSRPP 372
Query: 748 XGPXGXXXXPGRPXP 792
P G P P P
Sbjct: 373 APPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Frame = +1
Query: 571 PPPXPXPLXXXPPLASXPX-TXLPXP---RGXXSPXPPXPGGA*PRYQXFXXWGAPPGAX 738
PPP P PP+ P T P P G P PP P G P G PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP--GMPPPPP 331
Query: 739 XPFXGPXGXXXXPGRPXPXRXFP 807
GP G P P P +P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYP 354
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P PP P P G G PG P P G PGG P
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Query: 710 KKXWYRG*APPG 675
Y A PG
Sbjct: 361 PPPRYPS-AGPG 371
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +1
Query: 571 PPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRY-QXFXXWGAPPGAXXPF 747
PPP P P + P P R PP P PRY PP P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP----PRYPSAGPGMYPPPPPSRPP 382
Query: 748 XGPXGXXXXPGRPXP 792
P G P P P
Sbjct: 383 APPSGHGMIPPPPPP 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/86 (31%), Positives = 29/86 (33%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXX 714
PP G G PP P PP P T P P SP PP GG+ P +
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPP----PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 715 WGAPPGAXXPFXGPXGXXXXPGRPXP 792
PP P G G P P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 36.7 bits (81), Expect = 0.025
Identities = 31/112 (27%), Positives = 37/112 (33%), Gaps = 2/112 (1%)
Frame = +1
Query: 526 SSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGG--A*PRY 699
S PP GG PP P PP S P LP P+ SP P G PR
Sbjct: 279 SPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 335
Query: 700 QXFXXWGAPPGAXXPFXGPXGXXXXPGRPXPXRXFPKNXXXXXXXXXAPXGG 855
+ +PP P P P R P + ++ P GG
Sbjct: 336 KRQAPERSPPTGSPPTGSP--PTGRPPRGGPGKSSEESSESREGPRGGPRGG 385
Score = 35.1 bits (77), Expect = 0.077
Identities = 26/80 (32%), Positives = 27/80 (33%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF 747
G PP P P PPLA P P SP PP G P G+PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSP--PPPPAAGSPPPPRTGSPPP-----PPTGSPPPPPAGG 287
Query: 748 XGPXGXXXXPGRPXPXRXFP 807
P P P P R P
Sbjct: 288 SPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/86 (31%), Positives = 29/86 (33%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXX 714
PP G G PP P PP P T P P SP PP GG+ P +
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPP----PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 715 WGAPPGAXXPFXGPXGXXXXPGRPXP 792
PP P G G P P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 36.7 bits (81), Expect = 0.025
Identities = 31/112 (27%), Positives = 37/112 (33%), Gaps = 2/112 (1%)
Frame = +1
Query: 526 SSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGG--A*PRY 699
S PP GG PP P PP S P LP P+ SP P G PR
Sbjct: 300 SPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 356
Query: 700 QXFXXWGAPPGAXXPFXGPXGXXXXPGRPXPXRXFPKNXXXXXXXXXAPXGG 855
+ +PP P P P R P + ++ P GG
Sbjct: 357 KRQAPERSPPTGSPPTGSP--PTGRPPRGGPGKSSEESSESREGPRGGPRGG 406
Score = 35.1 bits (77), Expect = 0.077
Identities = 26/80 (32%), Positives = 27/80 (33%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF 747
G PP P P PPLA P P SP PP G P G+PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSP--PPPPAAGSPPPPRTGSPPP-----PPTGSPPPPPAGG 308
Query: 748 XGPXGXXXXPGRPXPXRXFP 807
P P P P R P
Sbjct: 309 SPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/86 (31%), Positives = 29/86 (33%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXX 714
PP G G PP P PP P T P P SP PP GG+ P +
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPP----PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 715 WGAPPGAXXPFXGPXGXXXXPGRPXP 792
PP P G G P P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 36.7 bits (81), Expect = 0.025
Identities = 31/112 (27%), Positives = 37/112 (33%), Gaps = 2/112 (1%)
Frame = +1
Query: 526 SSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGG--A*PRY 699
S PP GG PP P PP S P LP P+ SP P G PR
Sbjct: 285 SPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 341
Query: 700 QXFXXWGAPPGAXXPFXGPXGXXXXPGRPXPXRXFPKNXXXXXXXXXAPXGG 855
+ +PP P P P R P + ++ P GG
Sbjct: 342 KRQAPERSPPTGSPPTGSP--PTGRPPRGGPGKSSEESSESREGPRGGPRGG 391
Score = 35.1 bits (77), Expect = 0.077
Identities = 26/80 (32%), Positives = 27/80 (33%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF 747
G PP P P PPLA P P SP PP G P G+PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSP--PPPPAAGSPPPPRTGSPPP-----PPTGSPPPPPAGG 293
Query: 748 XGPXGXXXXPGRPXPXRXFP 807
P P P P R P
Sbjct: 294 SPPPPRAGSPPPPPPPRGSP 313
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 35.5 bits (78), Expect = 0.058
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXX 714
PP G ++ GPPP P PP P P + P PP P+ Q
Sbjct: 681 PPPPQGQQYYGGPPPPGQP--YGPPGGYPPQQQRPPYQAQPYPGPPP-----PQQQRGYG 733
Query: 715 WGAPPGAXXPFXGPXGXXXXP 777
+ PP P+ P G P
Sbjct: 734 YPPPPQPGHPYQQPYGQMPPP 754
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 35.5 bits (78), Expect = 0.058
Identities = 23/81 (28%), Positives = 29/81 (35%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXX 714
PP G ++ GPPP P PP P P + P PP P+ Q
Sbjct: 681 PPPPQGQQYYGGPPPPGQP--YGPPGGYPPQQQRPPYQAQPYPGPPP-----PQQQRGYG 733
Query: 715 WGAPPGAXXPFXGPXGXXXXP 777
+ PP P+ P G P
Sbjct: 734 YPPPPQPGHPYQQPYGQMPPP 754
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 33.9 bits (74), Expect = 0.18
Identities = 29/97 (29%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRX-GXGRPGXXXXPQGPXKGXXAPGGAPQ 714
P G P P A PG G G R G P PQGP G PG +
Sbjct: 165 PAGPQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGG 224
Query: 713 XKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGG 603
G AP GG G+ G A GG
Sbjct: 225 AGAPGPAG-APGAPGGPGQPGQDGQPGAPGNDGAPGG 260
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.9 bits (74), Expect = 0.18
Identities = 22/68 (32%), Positives = 24/68 (35%)
Frame = +1
Query: 460 PGCGXXFXXPPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLP 639
PG + PP G S PP GG F GPPP P PP P P
Sbjct: 403 PGGPGGYGPPPPGGPGA---PGSYGPPQGGPGGF--GPPPPGGPGAYGPPPTGFPPVGAP 457
Query: 640 XPRGXXSP 663
P +P
Sbjct: 458 PPGAAGAP 465
Score = 31.5 bits (68), Expect = 0.95
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 2/109 (1%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPP--LASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXF 708
PP G F PP P P P + P P PP P + P
Sbjct: 322 PPQGAPQQGFGAPPQGP-PQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAP 380
Query: 709 XXWGAPPGAXXPFXGPXGXXXXPGRPXPXRXFPKNXXXXXXXXXAPXGG 855
PPGA P G PG P P P GG
Sbjct: 381 PPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGG 429
Score = 31.1 bits (67), Expect = 1.3
Identities = 35/118 (29%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGG-GXXFFXGPPP----XPXPL---XXXPPLASXPXTXLPX 642
PP F PP GG F PPP P P PP++S P P
Sbjct: 322 PPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPP 381
Query: 643 PR----GXXSPXPPXPGGA*PRYQXFXXWGAP----PGAXXPFXGPXGXXXXPGRPXP 792
P+ G +P PP GA +G P PGA + P G G P P
Sbjct: 382 PQSGPPGAFAP-PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = +1
Query: 478 FXXPPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXX 657
F P G G + PP G G GPP P PP P P P G
Sbjct: 397 FGAPQGPGGPGGY---GPPPPGGPGAPGSYGPPQG-GPGGFGPPPPGGPGAYGPPPTGFP 452
Query: 658 SPXPPXPGGA 687
P PG A
Sbjct: 453 PVGAPPPGAA 462
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPP----XPGGA*PRYQ 702
PP F PP P PP ++ P G P PP PG P
Sbjct: 369 PPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQG 428
Query: 703 XFXXWGAPPGAXXPFXGPXGXXXXP-GRPXP 792
+G PP GP P G P P
Sbjct: 429 GPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 33.5 bits (73), Expect = 0.24
Identities = 33/112 (29%), Positives = 36/112 (32%)
Frame = +1
Query: 445 TGXXXPGCGXXFXXPPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXP 624
TG PG PPG + + P G G PP P+ P A P
Sbjct: 229 TGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAF-PPGASAPVAPGMPGAFPP 287
Query: 625 XTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPFXGPXGXXXXPG 780
P G P P PGG P GA PG P P G PG
Sbjct: 288 GQGGPGMPGSFPPGAPGPGG--PGMPGSFAPGA-PGPGGPGGYPSGGPGMPG 336
Score = 29.5 bits (63), Expect = 3.8
Identities = 33/125 (26%), Positives = 37/125 (29%), Gaps = 8/125 (6%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPX----PRGXXSPXPPXPGGA*PRYQ 702
P GG F P + P S + P P+ S PP GG P
Sbjct: 178 PQAGGSPSSFQAGAPTSQNVQGYPGGPSSAPSAYPGAPQVPQAPNSFIPPGTGGFPPGQP 237
Query: 703 XFXXWGAPPGAXXPFXGPXGXXXXPGRPXPXRXFPKN----XXXXXXXXXAPXGGVFXXS 870
+ PPG P P G P P R FP P G
Sbjct: 238 TAGSF--PPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMP 295
Query: 871 GSFPP 885
GSFPP
Sbjct: 296 GSFPP 300
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = -1
Query: 872 PEXXKTPPXGAPXPGXK-GGRFLGNXRXGXGRP-GXXXXPQGPXKGXXAPGGAPQXKKXW 699
P P G PG G F + P G PQGP P GA
Sbjct: 221 PNSFIPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPG 280
Query: 698 YRG*APPGXGGXG 660
G PPG GG G
Sbjct: 281 MPGAFPPGQGGPG 293
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 33.1 bits (72), Expect = 0.31
Identities = 29/97 (29%), Positives = 30/97 (30%), Gaps = 1/97 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRX-GXGRPGXXXXPQGPXKGXXAPGGAPQ 714
P G P P A PG G G R G P PQGP G PG +
Sbjct: 165 PAGPQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGG 224
Query: 713 XKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGG 603
G AP GG G G A GG
Sbjct: 225 AGAPGPAG-APGAPGGPGNAGTPGTPGAPGNAGAPGG 260
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.31
Identities = 26/84 (30%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLG-NXRXGXGRPGXXXXPQGPXKGXXAPGGAPQ 714
P G P P PG G G GRPG G P GAP
Sbjct: 90 PAGPPGPPGQPGAPGEQGHPGLAGQPGSGARINPATGRPGFCITCPAGAPGPAGPPGAPG 149
Query: 713 XKKXWYRG*APPGXGGXGEXXPRG 642
K + AP GG G PRG
Sbjct: 150 PKGNNGQPGAPAQSGGRGPPGPRG 173
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 571 PPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGG 684
PPP P PL A P P G P PP PGG
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 32.7 bits (71), Expect = 0.41
Identities = 27/96 (28%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P+ P A PG G G G PG P GP APG +
Sbjct: 105 PPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPG----PPGPDGNPGAPGNDGEA 160
Query: 710 KKXWYRG*APPGXGG-XGEXXPRGXGXXVXGXEAXG 606
R + PG G G P G G G
Sbjct: 161 GSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPG 196
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 32.7 bits (71), Expect = 0.41
Identities = 27/96 (28%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P+ P A PG G G G PG P GP APG +
Sbjct: 105 PPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPG----PPGPDGNPGAPGNDGEA 160
Query: 710 KKXWYRG*APPGXGG-XGEXXPRGXGXXVXGXEAXG 606
R + PG G G P G G G
Sbjct: 161 GSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPG 196
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.41
Identities = 26/77 (33%), Positives = 26/77 (33%)
Frame = +1
Query: 562 FXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXX 741
F PPP P PP P G P PP GG P F GAPP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF---GAPP---- 115
Query: 742 PFXGPXGXXXXPGRPXP 792
P P G P P P
Sbjct: 116 PPPPPSGLGVAPQPPRP 132
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*P 693
PP G F PPP P + PP+ + P G P PP G P
Sbjct: 67 PPVPNG---FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.72
Identities = 30/102 (29%), Positives = 31/102 (30%), Gaps = 3/102 (2%)
Frame = -1
Query: 884 GGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXK-GXXAPGGAPQXK 708
GG P PP G P GG G PG P GP + G G P
Sbjct: 249 GGPGPAGPPGPP-GPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTD 307
Query: 707 KXWYRG*AP--PGXGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
Y P P GG G P G G GG G
Sbjct: 308 AA-YCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSG 348
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.95
Identities = 29/90 (32%), Positives = 29/90 (32%), Gaps = 8/90 (8%)
Frame = +1
Query: 538 PXGGGXXFFXGPPPXPXPL----XXXPPLA----SXPXTXLPXPRGXXSPXPPXPGGA*P 693
P GGG PPP P P PPL P LP G P GGA P
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGGAAP 79
Query: 694 RYQXFXXWGAPPGAXXPFXGPXGXXXXPGR 783
Y PP A P G GR
Sbjct: 80 AYV-----APPPAAGYAAPPPAGGYATAGR 104
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.95
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P PP G P P G G G P P G APGG +
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 710 KKXWYRG*APPGXGG-XGEXXPRG 642
G PG G G P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 5/106 (4%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXK----GXXAPGG 723
P G P+ P G PG G G PG P P G PG
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 722 A-PQXKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
A P PG GG G P+G A G G
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGPG 268
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.95
Identities = 29/103 (28%), Positives = 33/103 (32%), Gaps = 2/103 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTP--PXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAP 717
P G P+ K P P G P P G G PG P GP G G P
Sbjct: 145 PAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGP-PGENGRNGEP 203
Query: 716 QXKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
Q +P G G+ RG A GG +G
Sbjct: 204 QPG-------SPGEPGRPGQPGSRGPAGQPGKDGAQGGPGEKG 239
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 0.95
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P PP G P P G G G P P G APGG +
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 710 KKXWYRG*APPGXGG-XGEXXPRG 642
G PG G G P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 5/106 (4%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXK----GXXAPGG 723
P G P+ P G PG G G PG P P G PG
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 722 A-PQXKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
A P PG GG G P+G A G G
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGPG 268
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.5 bits (68), Expect = 0.95
Identities = 25/89 (28%), Positives = 27/89 (30%), Gaps = 1/89 (1%)
Frame = -1
Query: 845 GAPXP-GXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQXKKXWYRG*APPGXG 669
G P P G + F G G GRPG G +G G W G
Sbjct: 23 GPPSPWGFRPSPFFGGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGW------GNNG 76
Query: 668 GXGEXXPRGXGXXVXGXEAXGGXXXRGXG 582
G G G G G GG G G
Sbjct: 77 GGGNWGGNGGGGNGGGGRGGGGGGGGGRG 105
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 0.95
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P PP G P P G G G P P G APGG +
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 710 KKXWYRG*APPGXGG-XGEXXPRG 642
G PG G G P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 5/106 (4%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXK----GXXAPGG 723
P G P+ P G PG G G PG P P G PG
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 722 A-PQXKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
A P PG GG G P+G A G G
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGPG 268
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.95
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P G P PP G P P G G G P P G APGG +
Sbjct: 151 PGGPPGPAGPAGPP-GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 710 KKXWYRG*APPGXGG-XGEXXPRG 642
G PG G G P G
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAG 233
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 5/106 (4%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXK----GXXAPGG 723
P G P+ P G PG G G PG P P G PG
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 722 A-PQXKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
A P PG GG G P+G A G G
Sbjct: 223 AGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGPG 268
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 31.5 bits (68), Expect = 0.95
Identities = 26/84 (30%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLG-NXRXGXGRPGXXXXPQGPXKGXXAPGGAPQ 714
P G P A PG G G GRPG G P GAP
Sbjct: 90 PAGPPGPPGQPGARGEAGLPGIAGQPGSGARINPATGRPGFCITCPAGAPGPAGPPGAPG 149
Query: 713 XKKXWYRG*APPGXGGXGEXXPRG 642
K + AP GG G PRG
Sbjct: 150 PKGNNGQPGAPAQSGGRGPPGPRG 173
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +1
Query: 583 PXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPFXGPXG 762
P P PP P P P G P PG P Y P G P P G
Sbjct: 700 PPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGY--PGYGPPGAMRPPAGFAPPPGAPYG 757
Query: 763 XXXXPGRPXPXRXFPKN 813
PG P P P +
Sbjct: 758 --YPPGAPPPAGFHPSH 772
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.3
Identities = 35/112 (31%), Positives = 38/112 (33%), Gaps = 7/112 (6%)
Frame = +2
Query: 449 GXXPPAAXXXFXPPRGXVFRXFSFXXXPXPPXGEGXXFFXAP------PXXPXPXXXXXX 610
G PP A F P G +F P PP G+ F AP P P P
Sbjct: 107 GGVPPQAQP-FNPHGGSMFGGPGGPGGP-PPFGQ--PFQQAPQGMFNVPTGPPPLMGGGG 162
Query: 611 WPR-PPXRXFPXPGGXXLXXPQXRGGPNPDTXFFXXGGLPPGXXXLXRGPXG 763
PR PP PG + P GG GG PPG GP G
Sbjct: 163 DPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG-PGGPGG 213
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/83 (31%), Positives = 28/83 (33%)
Frame = -1
Query: 884 GGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQXKK 705
GG DP + PP G P GG G G P GP G PGG
Sbjct: 160 GGGDP---RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG------ 210
Query: 704 XWYRG*APPGXGGXGEXXPRGXG 636
P G GG G P+ G
Sbjct: 211 -------PGGPGGPGGMLPKSHG 226
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +1
Query: 646 RGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPFXGPXGXXXXPGRPXP 792
RG P P PGG P+ Q F P F GP G PG P P
Sbjct: 96 RGLGGPPPGMPGGVPPQAQPFN-----PHGGSMFGGPGG----PGGPPP 135
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.3
Identities = 35/112 (31%), Positives = 38/112 (33%), Gaps = 7/112 (6%)
Frame = +2
Query: 449 GXXPPAAXXXFXPPRGXVFRXFSFXXXPXPPXGEGXXFFXAP------PXXPXPXXXXXX 610
G PP A F P G +F P PP G+ F AP P P P
Sbjct: 387 GGVPPQAQP-FNPHGGSMFGGPGGPGGP-PPFGQ--PFQQAPQGMFNVPTGPPPLMGGGG 442
Query: 611 WPR-PPXRXFPXPGGXXLXXPQXRGGPNPDTXFFXXGGLPPGXXXLXRGPXG 763
PR PP PG + P GG GG PPG GP G
Sbjct: 443 DPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG-PGGPGG 493
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/83 (31%), Positives = 28/83 (33%)
Frame = -1
Query: 884 GGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQXKK 705
GG DP + PP G P GG G G P GP G PGG
Sbjct: 440 GGGDP---RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG------ 490
Query: 704 XWYRG*APPGXGGXGEXXPRGXG 636
P G GG G P+ G
Sbjct: 491 -------PGGPGGPGGMLPKSHG 506
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +1
Query: 646 RGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPFXGPXGXXXXPGRPXP 792
RG P P PGG P+ Q F P F GP G PG P P
Sbjct: 376 RGLGGPPPGMPGGVPPQAQPFN-----PHGGSMFGGPGG----PGGPPP 415
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 571 PPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PR 696
P P P PP P P P P PP P A PR
Sbjct: 540 PSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPR 581
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.3
Identities = 29/103 (28%), Positives = 33/103 (32%), Gaps = 2/103 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTP--PXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAP 717
P G P+ K P P G P P G G PG P GP G G P
Sbjct: 147 PAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGP-PGENGNNGEP 205
Query: 716 QXKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
Q AP G G+ RG + GG +G
Sbjct: 206 QPG-------APGEPGQPGQPGQRGPAGEPGKDGSPGGQGEKG 241
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +1
Query: 571 PPPXPXP---LXXXPPLASXPXTXLPXPRGXXSPXPPXP 678
PPP P P L PP P T P G P PP P
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPP--XPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*P 693
PP GG + GPPP PPL P P G P PP P G P
Sbjct: 1561 PPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGP----PPRLGMPPPGPPPPNGGPP 1611
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +1
Query: 487 PPGXGXSXFFFXXSSXPPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPX 666
PP G F + PP F G PP P P++S P P PRG
Sbjct: 727 PPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFG-RGAGPMSSFP----PPPRGGMHHM 781
Query: 667 PPXP 678
PP P
Sbjct: 782 PPPP 785
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +1
Query: 526 SSXPPXGGGXXFFXGPPP-XPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGG 684
S+ PP G F GPPP L PP P P P P PP G
Sbjct: 62 STMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPP--PPPHYYTQPPPPPQSG 113
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.2
Identities = 32/111 (28%), Positives = 34/111 (30%), Gaps = 7/111 (6%)
Frame = +1
Query: 571 PPPXPXPLXXXP----PLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAX 738
PPP P P P PLAS P +P P P P P A P APP A
Sbjct: 67 PPPAPYPQHAVPAPAPPLASYPQNAVPVP---APPPAPYPQHAVPA-------PAPPPAP 116
Query: 739 XP---FXGPXGXXXXPGRPXPXRXFPKNXXXXXXXXXAPXGGVFXXSGSFP 882
P P P P P +P AP S P
Sbjct: 117 YPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRP 167
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.5 bits (63), Expect = 3.8
Identities = 29/86 (33%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQX 711
P GG P+ PP G PG G G R G PG G G PG Q
Sbjct: 151 PAGGPGPKGPPGPPGGHGEPGPAG---RGGPRGPPG-PGGPQGEAGEDGGAGNPGTPGQV 206
Query: 710 KKXWYRG*APPG-XGGXGEXXPRGXG 636
+ +PPG G GE P G G
Sbjct: 207 RSL----PSPPGEPGQPGE--PGGPG 226
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Frame = -1
Query: 845 GAPX-PGXKGGRFLGNXRXGXGRPGXXXXPQGPXK--GXXAPGGAPQXKKXWYRG*APPG 675
GAP PG G +G G PG P GP + PG A Q P
Sbjct: 170 GAPGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGP 229
Query: 674 XGGXGEXXPRGXGXXVXGXEAXGGXXXRG 588
G G P G G GG G
Sbjct: 230 NGQPGPRGPPGQAGSPGGNGQPGGPGQPG 258
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +1
Query: 562 FXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXX 741
+ GP P P+ + + LP P G P PP P G R+ G P
Sbjct: 156 YVGPHAGPGPMSHHTNMGNV----LPGPPGP--PGPPGPAGRDGRHGLKGDRGLPGFDGE 209
Query: 742 PFXGPXGXXXXPGR 783
GP G PGR
Sbjct: 210 SKIGPKGETGSPGR 223
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 574 PPXPXPLXXXPPLASXPXTXLPXPRGXXSPXP 669
PP P P P L + + LP P G +P P
Sbjct: 124 PPAPSPFIPQPSLPNIISSMLPAPSGGATPSP 155
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/92 (28%), Positives = 27/92 (29%), Gaps = 6/92 (6%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXS----PXPPXPGGA*PRYQ 702
P G PP P P P + P P G P P PG A P
Sbjct: 173 PDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGP 232
Query: 703 XFXXW--GAPPGAXXPFXGPXGXXXXPGRPXP 792
GA P A GP G G P P
Sbjct: 233 AGPPGPDGASPTAAPGAAGPPGPPGPAGAPGP 264
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 571 PPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXP 678
PPP P P PP P P P P PP P
Sbjct: 55 PPPPPCPAQFCPPPPICPPPP-PPPMPCPPPPPPMP 89
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPG 681
GPPP P PP +S +P P + PP G
Sbjct: 128 GPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPPPSG 165
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPG 681
GPPP P PP +S +P P + PP G
Sbjct: 151 GPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPPPSG 188
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPG 681
GPPP P PP +S +P P + PP G
Sbjct: 401 GPPPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPPPSG 438
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.1 bits (62), Expect = 5.1
Identities = 27/97 (27%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRX-GXGRPGXXXXPQGPXKGXXAPGGAPQ 714
P G P P PG G G R G P PQGP G PG +
Sbjct: 175 PAGPTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGG 234
Query: 713 XKKXWYRG*APPGXGGXGEXXPRGXGXXVXGXEAXGG 603
G AP G G+ G A GG
Sbjct: 235 SGTPGQPG-APGAPGHPGQAGTPGTPGAPGNSGAPGG 270
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/79 (32%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Frame = -1
Query: 854 PPXGAPXPGXKGGRFLGNXRXGXGRPG-----XXXXPQGPXKGXXAPG--GAPQXKKXWY 696
PP PG KG R G PG P GP PG G
Sbjct: 187 PPGPTGAPGDKGSRGYPGESGEPGTPGSAGPKGNAGPAGPPGPPGYPGRPGETGDHGKTI 246
Query: 695 RG*APPG-XGGXGEXXPRG 642
G APPG G GE P+G
Sbjct: 247 AGEAPPGPPGRQGEMGPQG 265
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.7
Identities = 26/92 (28%), Positives = 27/92 (29%), Gaps = 6/92 (6%)
Frame = +1
Query: 535 PPXGGGXXFFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXS----PXPPXPGGA*PRYQ 702
P G PP P P P + P P G P P PG A P
Sbjct: 174 PDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGP 233
Query: 703 XFXXW--GAPPGAXXPFXGPXGXXXXPGRPXP 792
GA P A GP G G P P
Sbjct: 234 AGPPGPDGASPTAAPGAAGPPGPPGPAGAPGP 265
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 559 FFXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXP 678
F PPP P L P A+ P P P PP P
Sbjct: 321 FILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPP 360
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = -1
Query: 890 PXGGXDPEXXKT-PPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGP-XKGXXAPGGAP 717
P G P+ P A PG G + GRPG P P +G P GAP
Sbjct: 187 PAGQLGPQGGSNVAPSPAGEPGAPGAQGPKGPPGAAGRPGRDGQPGAPGDQGENGPDGAP 246
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = -1
Query: 890 PXGGXDPEXXKT-PPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGP-XKGXXAPGGAP 717
P G P+ P A PG G + GRPG P P +G P GAP
Sbjct: 240 PAGQLGPQGGSNVAPSPAGEPGAPGAQGPKGPPGAAGRPGRDGQPGAPGDQGENGPDGAP 299
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF 747
GPP P P + P +G P P PG P PG
Sbjct: 210 GPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGP-PGIPGA--PGQPGRPGPPGEPGTYKTE 266
Query: 748 XGPXGXXXXPGRPXP 792
GP G PGRP P
Sbjct: 267 VGPAGRAGAPGRPGP 281
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +1
Query: 571 PPPX--PXPLXXXPPLASXPXTXLPXPRGXXSPXPPXP 678
PPP P PL PP P P P P PP P
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = +1
Query: 574 PPXPXPLXXXPPLASXPXTXLP---XPRGXXSPXPPXP 678
PP P P+ PPL P P P P PP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP 68
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF 747
GPP P P + P +G P P PG P PG
Sbjct: 191 GPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGP-PGIPGA--PGQPGRPGPPGEPGTYKTE 247
Query: 748 XGPXGXXXXPGRPXP 792
GP G PGRP P
Sbjct: 248 VGPAGRAGAPGRPGP 262
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.9
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGP--XKGXXAPGGAP 717
P G K PP PG GG G R G PG P+GP G GG P
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGGPGRGGNR---GPPG----PRGPPGEAGPDGEGGRP 195
Query: 716 QXKKXWYRG*APPGXGG 666
+PPG G
Sbjct: 196 GQAGQTRSAPSPPGQPG 212
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.9
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Frame = -1
Query: 890 PXGGXDPEXXKTPPXGAPXPGXKGGRFLGNXRXGXGRPGXXXXPQGP--XKGXXAPGGAP 717
P G K PP PG GG G R G PG P+GP G GG P
Sbjct: 143 PPGAVGGPGPKGPPGPPGGPGELGGPGRGGNR---GPPG----PRGPPGEAGPDGEGGRP 195
Query: 716 QXKKXWYRG*APPGXGG 666
+PPG G
Sbjct: 196 GQAGQTRSAPSPPGQPG 212
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/75 (32%), Positives = 25/75 (33%)
Frame = +1
Query: 568 GPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXXPF 747
G P P P P T P P PP P GA P PPG
Sbjct: 122 GAPGAPGHPGKPPQSPCEPLTPPPCPA-----CPPGPPGA-PGAPGKPGSEGPPGPPG-H 174
Query: 748 XGPXGXXXXPGRPXP 792
GP G PG+P P
Sbjct: 175 DGPNGGPGQPGQPGP 189
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -1
Query: 845 GAPX-PGXKGGRFLGNXRXGXGRPGXXXXPQGPXKGXXAPGGAPQXKKXWYRG*APPGXG 669
GAP PG KG G G+PG KG GAP P G
Sbjct: 182 GAPGQPGSKGNNGAPGAAGGPGQPGRPGKDGQRGKGSAGAPGAPGKAGPAGPAGGPGNNG 241
Query: 668 GXGEXXPRG 642
G P G
Sbjct: 242 SAGTPGPAG 250
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/101 (23%), Positives = 27/101 (26%)
Frame = -3
Query: 762 PXGPRKRXXXPGGSPPXXKXLVSGLGPPRXWGXXRXXPPGXGKXRXGGRGQXXXXXXGXG 583
P GP G +P + V GPP G G GQ G
Sbjct: 178 PPGPEGAPGEDGNTPS--RGGVGEAGPPGPPGTSGNPGTDGAPGNPGAPGQVTETPGTPG 235
Query: 582 XXGGAXKKXXPSPXGGXGXXXKEKXRXTXPRGGXKXXXAAG 460
G A P P G G + P G A G
Sbjct: 236 PAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDAGPDGAPG 276
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/77 (29%), Positives = 25/77 (32%)
Frame = +1
Query: 562 FXGPPPXPXPLXXXPPLASXPXTXLPXPRGXXSPXPPXPGGA*PRYQXFXXWGAPPGAXX 741
F P P P P+ P P P P G P P P G P PG
Sbjct: 925 FIPPIPVPNPIPKPNP---GPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSG 981
Query: 742 PFXGPXGXXXXPGRPXP 792
P GP P +P P
Sbjct: 982 P-NGP----SDPNKPSP 993
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,967
Number of Sequences: 27780
Number of extensions: 307563
Number of successful extensions: 1538
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2563248310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -