Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_E10
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1468 + 33811471-33811657,33811888-33811980,33812899-338130...    28   8.3  

>04_04_1468 +
           33811471-33811657,33811888-33811980,33812899-33813027,
           33813089-33813166,33813377-33813435,33813522-33813644,
           33814225-33814282,33814383-33814468,33814564-33814635
          Length = 294

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -3

Query: 236 LECCHQSHCQMXQSLLCASRS*XRWPCQVQSVLAS*YTVEVILSRRRSLLKISEYEKSYL 57
           +EC  Q      QS+LC  R   R  C ++  LA  Y+  V       L +I+ +E   +
Sbjct: 104 IECSTQGVRNTHQSILCCGRRLKRLACDLKK-LAECYSKTVKRCLFMFLQQIAAHEVEEI 162

Query: 56  SIRQILR 36
            +  +LR
Sbjct: 163 GVEHLLR 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,364,428
Number of Sequences: 37544
Number of extensions: 164875
Number of successful extensions: 199
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)