Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_E02
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 28 2.1
SPAC12G12.12 |||NST UDP-galactose transporter|Schizosaccharomyce... 28 2.1
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 27 2.8
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 27 2.8
SPAC56E4.07 |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 27 3.7
SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 27 3.7
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 4.9
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 27 4.9
SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schi... 26 6.5
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 511 ANDIETSGILTLISVVFLLATFAVYTYFPNLRD----LQGLMLHVYEHKYGAWILVIGST 678
AN ++T SV+ ++ T +T F + +G+ L VY K G W +V G+T
Sbjct: 7 ANKSCCGAVVTAFSVIGIVFTILKFTSFASFVYKTFFAKGVKLSVYGAKKGYWAVVTGAT 66
>SPAC12G12.12 |||NST UDP-galactose transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 469 IISIALVCFEPSLKANDIETSGILTLISVV---FLLAT-FAVYTYFPNLRDLQGLMLHVY 636
++ +A+V + S ++ I ++ IL + +V+ F LAT F + Y + + L Y
Sbjct: 139 VLGVAIVGYSGS--SSSIGSNPILGITAVLIGQFFLATQFTIEEYILSFIQVDPSELVAY 196
Query: 637 EHKYGAWILVIGSTATEYRVPS 702
E YG + +++G + Y + S
Sbjct: 197 EGTYGVFFVLLGMIISYYFIGS 218
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 386 LQILFSPKILMSIVSVPCTKTVQTLVRELSPLR-LYASN 499
LQ+ SP +L V+ PC K++ ++REL + Y SN
Sbjct: 178 LQVYTSPNLLR--VNAPCRKSLSEMLRELKDIEDDYGSN 214
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 568 ATFAVYTYFPNLRDLQGLMLHVYEHKYGAWILVIGSTATEYRV----PSRFMYIDRIRRV 735
A++ Y Y + L + H+Y H YG L G TAT YRV +F+ +++RRV
Sbjct: 50 ASYRGYAY--SRHGLYKAIKHIY-HVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRV 106
>SPAC56E4.07 |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 235
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 433 AMYKNGT-DSSSGIISIALVCFEPSLKANDI 522
A+YK G + G I I VC +P+L+ N +
Sbjct: 134 ALYKTGLLKNPKGFIHIHFVCVDPALQGNGV 164
>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 320
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 620 SPWRSLKFGKYVYTAKVANKNTTEINVSIPLVSMSLALSDGSKHTSAMEIIPELESVP 447
S + S+K+G +V V N E+ IP +S SL L DGS ++ + S+P
Sbjct: 233 SNFSSIKYG-FVVIIIVGELNDVELK--IPAISHSLKLKDGSILVLRSSLLHQWYSLP 287
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 472 ISIALVCFEPSLKANDIETSGILTLISVVFLLATFAVYTYFPNLRDLQGLMLHV 633
I +AL C + + +T + +++SVVFLL T A+ + + +Q M H+
Sbjct: 477 IRLALFCVLTTYNVSLSQTILLTSIMSVVFLLQTGALAPFINDNPLIQSGMRHI 530
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 534 NTNI-NLCSVFISDFRCVHIFSKF 602
N NI N+ ++I FRC+HI +F
Sbjct: 93 NENIVNIFDLYIDQFRCLHIVMEF 116
>SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase
Hat1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 784 VYTNHVHPKECXYHPS 737
V N H K+C YHPS
Sbjct: 18 VQVNEKHEKDCQYHPS 33
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,363,576
Number of Sequences: 5004
Number of extensions: 70498
Number of successful extensions: 195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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