Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_E02
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0204 - 14253258-14253383,14253685-14253878,14254029-142547...    29   6.8  

>08_02_0204 -
           14253258-14253383,14253685-14253878,14254029-14254743,
           14254811-14254837,14258779-14258838,14263174-14264844,
           14267402-14267518,14267593-14267763,14270248-14270346,
           14271684-14271770,14272392-14272475,14272929-14273068,
           14274414-14274494,14275492-14275680,14275986-14276022
          Length = 1265

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +1

Query: 262 GVIISPRGKCGTE-PMVSMNCSNGRL-LLKDIILNGNKVSTQDTPDFVFAEDPDEYCLGA 435
           G  + P   CGT   + +    +G + +L D   + NK+    TP FV      E C   
Sbjct: 115 GAYVDPLSDCGTPLHLAATEGQDGTMKILLDHKADYNKMVLGMTPLFVAINHASEKCAKL 174

Query: 436 MYKNGTDSSSGIISIAL 486
           + K G D +   +  AL
Sbjct: 175 LVKAGADINGDYVLTAL 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,124,005
Number of Sequences: 37544
Number of extensions: 427680
Number of successful extensions: 985
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)