Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_E02
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ...    31   1.5  
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related...    31   1.5  
Z37092-8|CAA85460.2|  327|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AY037792-1|AAK94756.1|  327|Caenorhabditis elegans SRA-12 protein.     30   2.0  
Z78536-1|CAB01715.2|  417|Caenorhabditis elegans Hypothetical pr...    29   6.1  
U58728-1|AAB00588.1|  430|Caenorhabditis elegans Temporarily ass...    28   8.1  

>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
           protein ZK675.1 protein.
          Length = 1405

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 LAFKQKKHEGNYFIRVIV-LWNRCIREAMLSRWRNNFTTG*MRHRAN 305
           L FKQK    +    + +  WN    E +L  W+ NFT     H+AN
Sbjct: 575 LRFKQKPGRNSMKTGLDMDAWNETAAEQVLQAWQRNFTKSLYNHKAN 621


>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
           repeats, ras-likedomain, kinase protein 1 protein.
          Length = 2395

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 362 PFKIISFNSNLPLLQFMLTIGSVPHLP 282
           PF + +FN NLPL+  +L  G+  +LP
Sbjct: 367 PFMLAAFNQNLPLMTLLLDAGADVNLP 393


>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
           kinase protein.
          Length = 2393

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 362 PFKIISFNSNLPLLQFMLTIGSVPHLP 282
           PF + +FN NLPL+  +L  G+  +LP
Sbjct: 365 PFMLAAFNQNLPLMTLLLDAGADVNLP 391


>Z37092-8|CAA85460.2|  327|Caenorhabditis elegans Hypothetical
           protein F44F4.7 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +2

Query: 605 ETSKGLCYMSMSISMALGFLSLGVLQLNTGFRQDLCTLTGFVVYTWM 745
           +T++ +CY+S++  +A+   S GVL +    R+++ TL  F V  W+
Sbjct: 230 KTTQAICYLSIAQFLAMFMYSGGVLLMRKN-RENIPTLIYFNVIVWV 275


>AY037792-1|AAK94756.1|  327|Caenorhabditis elegans SRA-12 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +2

Query: 605 ETSKGLCYMSMSISMALGFLSLGVLQLNTGFRQDLCTLTGFVVYTWM 745
           +T++ +CY+S++  +A+   S GVL +    R+++ TL  F V  W+
Sbjct: 230 KTTQAICYLSIAQFLAMFMYSGGVLLMRKN-RENIPTLIYFNVIVWV 275


>Z78536-1|CAB01715.2|  417|Caenorhabditis elegans Hypothetical
           protein C07A4.2 protein.
          Length = 417

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 659 IQAPYLCS*TCNISPWRSLKFGKYVYTAKVANKNTTEINVSIPLVSMS 516
           IQ+ YL     N S WR + F K  +  ++  KN+ +I V + +V  S
Sbjct: 327 IQSFYLEGIGYNYSSWRPMSFFKTGHFTQLIWKNSRKIGVGVSIVKSS 374


>U58728-1|AAB00588.1|  430|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 294 protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 190 CFFCLNASDNQSRAICCNMHLVEINKNNTTM 98
           CF C       +R   CN ++VE+ K  TTM
Sbjct: 49  CFVCGTRKGTSTRRSTCNDNVVEMQKTITTM 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,620,781
Number of Sequences: 27780
Number of extensions: 398061
Number of successful extensions: 1002
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)