Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D23
         (1020 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        37   0.14 
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     37   0.14 
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    37   0.14 
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    31   6.7  
AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.     31   6.7  

>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 36.7 bits (81), Expect = 0.14
 Identities = 21/74 (28%), Positives = 24/74 (32%)
 Frame = +2

Query: 782  PXXSPSPXTRMXXDPRNGXXXPXXPXXXPXLGPRXXPESXRGXXPXXXXAPTPXEXXPXP 961
            P  SPSP      +P  G   P  P       P+  P S     P    +P P    P P
Sbjct: 104  PTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLP 163

Query: 962  XXSRXPXHXARPPP 1003
                 P     PPP
Sbjct: 164  GDLPPPPPPPPPPP 177


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 36.7 bits (81), Expect = 0.14
 Identities = 21/74 (28%), Positives = 24/74 (32%)
 Frame = +2

Query: 782  PXXSPSPXTRMXXDPRNGXXXPXXPXXXPXLGPRXXPESXRGXXPXXXXAPTPXEXXPXP 961
            P  SPSP      +P  G   P  P       P+  P S     P    +P P    P P
Sbjct: 522  PTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLP 581

Query: 962  XXSRXPXHXARPPP 1003
                 P     PPP
Sbjct: 582  GDLPPPPPPPPPPP 595


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen KW-13
            protein.
          Length = 991

 Score = 36.7 bits (81), Expect = 0.14
 Identities = 21/74 (28%), Positives = 24/74 (32%)
 Frame = +2

Query: 782  PXXSPSPXTRMXXDPRNGXXXPXXPXXXPXLGPRXXPESXRGXXPXXXXAPTPXEXXPXP 961
            P  SPSP      +P  G   P  P       P+  P S     P    +P P    P P
Sbjct: 413  PTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLP 472

Query: 962  XXSRXPXHXARPPP 1003
                 P     PPP
Sbjct: 473  GDLPPPPPPPPPPP 486


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 17/50 (34%), Positives = 17/50 (34%)
 Frame = +3

Query: 456 PXPXKPPLSQXGYXXPX*QXXPRSLXESDHPTNGPXIPTXPXPXGXXSPP 605
           P P  PPL       P     P  L  S  P N    P  P P G   PP
Sbjct: 331 PPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPP 380


>AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.
          Length = 889

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
 Frame = +2

Query: 770 PXAPPXXSPSPXTRMXXDPRNGXXXPXXPXXXPXLGPRXXP-ESXRGXXPXXXXAPTPXE 946
           P  PP   P P   M   P  G      P   P  GP   P  S R   P     P P  
Sbjct: 146 PPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSV 205

Query: 947 XXPXP 961
             P P
Sbjct: 206 VLPIP 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,181,277
Number of Sequences: 237096
Number of extensions: 1200481
Number of successful extensions: 2860
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13710264848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)