Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D20
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1448 - 37434159-37434242,37434875-37434968,37435077-374352...    29   3.9  
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730...    29   6.8  
08_01_0434 + 3809681-3810016,3810039-3811100                           29   6.8  
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    29   6.8  
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575...    28   9.0  

>01_06_1448 -
           37434159-37434242,37434875-37434968,37435077-37435250,
           37435536-37435627,37435947-37436056,37437274-37437349,
           37437445-37437537,37437617-37437817
          Length = 307

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
 Frame = +2

Query: 383 KCRECSVVVTRMDFARILGK-FTKVKIQFQSSSSTVKGKSTNPNLKSKLKSNENGFVRNE 559
           K +EC+ +V+  +FA ILG+ FT +  Q   ++ T+  +     +    K + +GF    
Sbjct: 71  KAKECTEIVSMEEFAVILGRHFTSLYPQVSEATVTIAERPWE-RVVVDGKPHSHGFKLGV 129

Query: 560 DYPTKESSKGKKINQSTNS--KAANILKENNRLKESLIKDR 676
           +    E    K  N   NS  +  ++LK      E  ++DR
Sbjct: 130 EKHVTEVIVKKSGNLLINSGIQGYSLLKTTQSGFEKFVRDR 170


>12_01_0797 +
           7300370-7300506,7300682-7300798,7301903-7302443,
           7302885-7304042,7304133-7304291,7304397-7304504,
           7305045-7305304,7305936-7306101,7307025-7307050,
           7307318-7307402,7307486-7307695,7308815-7308872,
           7308964-7309037,7309323-7309373,7309576-7309664,
           7310027-7310104,7310164-7310269
          Length = 1140

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +2

Query: 380 GKCRECSVVVTRMDFARILGKFTKVKIQFQSSSSTVKGKSTNPNLKSKLKSNENGFVRN 556
           G CR+CS   T  +   +LGK+ +  I+F    S   G+S     +  L S+ +  +R+
Sbjct: 721 GTCRDCSFG-TLDEQLDLLGKYLQNAIRFDIQQSNTPGRSIKELKRRPLCSSTHSLLRD 778


>08_01_0434 + 3809681-3810016,3810039-3811100
          Length = 465

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 476 YCFETESSLW*IFPISWQSPFV 411
           YCF+T S +W      W+ PFV
Sbjct: 310 YCFDTVSHVWSTVATGWKLPFV 331


>02_05_0484 -
           29401195-29401404,29401572-29401755,29401866-29403973,
           29404320-29404403,29404507-29404777,29404864-29405117,
           29405513-29405722,29406357-29406503
          Length = 1155

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 521 KLKSNENGFVRNEDYPTKESSKGKKINQSTNSKAANILKENNRLKESLIKDR 676
           +L+  EN   R  D+   E  +  ++N+S   K     K+  + KE L++DR
Sbjct: 619 ELEEKENELNRKMDFVENELKRAAELNESKIQKILLEKKQLQKEKEVLVEDR 670


>03_02_0124 -
           5749183-5749773,5750628-5751160,5751191-5753035,
           5753632-5753820,5753911-5754013,5754087-5754269,
           5754392-5754484,5755031-5755219,5756133-5756327
          Length = 1306

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 458 IQFQSSSSTVKGKS-TNPNLKSKLKSNENGFVRNEDYPTKESSKGKK 595
           +   +SSS   GK+ ++ N  S     +NGF+ NE+ P+   +  K+
Sbjct: 561 VSSMNSSSHYSGKAASDSNSVSSSYREDNGFIMNEELPSVSEASDKQ 607


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,482,762
Number of Sequences: 37544
Number of extensions: 344957
Number of successful extensions: 720
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)