Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D19
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-8|CAB04257.1|  208|Caenorhabditis elegans Hypothetical pr...    32   0.48 
Z49125-1|CAA88934.1|  424|Caenorhabditis elegans Hypothetical pr...    28   7.9  
M55997-1|AAA27995.1|  308|Caenorhabditis elegans cuticlin 1 prot...    28   7.9  

>Z81525-8|CAB04257.1|  208|Caenorhabditis elegans Hypothetical
           protein F33A8.3 protein.
          Length = 208

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
 Frame = -1

Query: 888 GXXQGXKWGLPGWXQDDSYRIRPTGRAERGFGHT-AQLGANDLHRTEIPTAGXMRXRHAS 712
           G  +G + G  G   D   R    G A RG G   ++ G          + G    R   
Sbjct: 115 GRGRGRRGGRGGIRHDSGSRDAEEGGAPRGGGRGGSRRGGGGRGGGRTNSGGEETARDTD 174

Query: 711 RREKGGQVSGKRQGRNRRAHEGASRG 634
             E+GG+  G+R GR R       RG
Sbjct: 175 GGERGGRGGGRRGGRGRGGRGRGGRG 200


>Z49125-1|CAA88934.1|  424|Caenorhabditis elegans Hypothetical
           protein C47G2.1 protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 825 RPTGRAERGFGHTAQLGANDLHRTEIPTAG 736
           RPT    +GFG   Q GA   H    P AG
Sbjct: 267 RPTCSEPQGFGAVKQAGAGGAHAAAAPQAG 296


>M55997-1|AAA27995.1|  308|Caenorhabditis elegans cuticlin 1
           protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 825 RPTGRAERGFGHTAQLGANDLHRTEIPTAG 736
           RPT    +GFG   Q GA   H    P AG
Sbjct: 152 RPTCSEPQGFGAVKQAGAGGAHAAAAPQAG 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,926,903
Number of Sequences: 27780
Number of extensions: 401762
Number of successful extensions: 1049
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)