Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D19
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       28   0.10 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.9  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   6.6  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   6.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   6.6  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   6.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   8.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 117 SMAGSNXPXLKGDPRPPVPTIXSXKGXP 34
           S AG   P   G P PP+P + +  G P
Sbjct: 403 SPAGGQLPPSAGAPMPPIPNMSNMSGMP 430


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 301 EKTSHTSTLNLKHKMNAIVVV 239
           E    T TLNLKH   A++V+
Sbjct: 56  EDAEDTQTLNLKHLRAAVLVL 76


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 620 DTRRFPLEAPSCALLFRPCR 679
           + R FP++  SC L+   C+
Sbjct: 165 ELRNFPMDRQSCPLILGSCK 184


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 108 GSNXPXLKGDPRPPVPTI 55
           G+N P     PRPP P +
Sbjct: 98  GNNRPVYISQPRPPHPRL 115



 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 108 GSNXPXLKGDPRPPVPTI 55
           G+N P     PRPP P +
Sbjct: 154 GNNRPVYISQPRPPHPRL 171



 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 108 GSNXPXLKGDPRPPVPTI 55
           G+N P     PRPP P I
Sbjct: 266 GNNRPVYIPQPRPPHPRI 283


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 108 GSNXPXLKGDPRPPVPTI 55
           G+N P     PRPP P I
Sbjct: 127 GNNRPVYIPQPRPPHPRI 144


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 108 GSNXPXLKGDPRPPVPTI 55
           G+N P     PRPP P I
Sbjct: 151 GNNRPVYIPQPRPPHPRI 168


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 108 GSNXPXLKGDPRPPVPTI 55
           G+N P     PRPP P I
Sbjct: 182 GNNRPVYIPQPRPPHPRI 199


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 301 EKTSHTSTLNLKHKM 257
           ++  H+STL++ HKM
Sbjct: 238 DENRHSSTLDIDHKM 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,137
Number of Sequences: 438
Number of extensions: 5544
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)