Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D18
         (967 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162...    44   2e-04
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315...    44   2e-04
02_02_0741 + 13590883-13591582,13591955-13592250                       29   7.3  
09_04_0461 + 17781413-17781474,17781576-17781629,17781729-177818...    28   9.7  
06_01_0651 + 4711369-4712431,4713069-4713763                           28   9.7  
03_06_0128 - 31879286-31879381,31879463-31879574,31879680-318797...    28   9.7  
01_06_1261 - 35826513-35828941,35829201-35829294                       28   9.7  

>06_03_0510 -
           21615724-21615909,21615992-21616075,21616164-21616217,
           21616324-21616371,21616529-21616611,21616963-21617113,
           21617648-21617785,21617966-21618094,21618391-21618596,
           21618734-21618845,21619145-21619204,21619331-21619429,
           21619520-21619575,21620230-21620313,21621407-21621500
          Length = 527

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 25/79 (31%), Positives = 45/79 (56%)
 Frame = +3

Query: 111 LLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 290
           + ERA ++  +   GS+T +P++     D++   P     IT+GQI+++ +L  + I P 
Sbjct: 351 IYERAGRIEGR--SGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPP 408

Query: 291 INVGLSVSRVGSAAQTKAM 347
           INV  S+SR+  +A  + M
Sbjct: 409 INVLPSLSRLMKSAIGEGM 427


>01_06_0458 +
           29531069-29531126,29531247-29531302,29531407-29531505,
           29531989-29532048,29532285-29532396,29532459-29532694,
           29533092-29533220,29533325-29533462,29534043-29534193,
           29534394-29534476,29534658-29534705,29534828-29534881,
           29534971-29535054,29535152-29535337
          Length = 497

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 25/79 (31%), Positives = 45/79 (56%)
 Frame = +3

Query: 111 LLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 290
           + ERA ++  + G  S+T +P++     D++   P     IT+GQI+++ +L  + I P 
Sbjct: 321 IYERAGRIEGRKG--SITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPP 378

Query: 291 INVGLSVSRVGSAAQTKAM 347
           INV  S+SR+  +A  + M
Sbjct: 379 INVLPSLSRLMKSAIGEGM 397


>02_02_0741 + 13590883-13591582,13591955-13592250
          Length = 331

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +3

Query: 537 CGVRGHLDKLDPSKITAF--EKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVK 704
           CG +GH  +  P K+ A   EK+  Q + ++     ST  KDG + P S A+   I K
Sbjct: 96  CGEQGHYVRNCPWKVFARSPEKDEKQCLGSNQAPSQSTDKKDGTLQPNSGANRTVIWK 153


>09_04_0461 +
           17781413-17781474,17781576-17781629,17781729-17781839,
           17781921-17781991,17782256-17782449,17783019-17783096
          Length = 189

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +3

Query: 54  VVPPAVRLILXDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNV 224
           ++P  V+++L  V Y       RA K  D++     TAL V+E  A +V+  +  NV
Sbjct: 72  MLPIWVQMVLGGVVYTAVPFYNRARKAEDEVTKNVETALEVVE-HAAEVTEKLAANV 127


>06_01_0651 + 4711369-4712431,4713069-4713763
          Length = 585

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 486 QGQYVPMAIEEQVAIIY-CGVRGHLDKLDPSKITAFEKE 599
           +GQ V + +   +A  Y CGV GH D L       F +E
Sbjct: 376 KGQAVALRVSADMAAAYRCGVEGHQDSLYAHSFRQFYRE 414


>03_06_0128 -
           31879286-31879381,31879463-31879574,31879680-31879747,
           31880959-31881072,31881207-31881247,31881340-31881393,
           31881785-31881866,31882063-31882116
          Length = 206

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 269 LQRYPTSHQRRSVCIACRIC 328
           L+RYPT  +R   CIAC++C
Sbjct: 97  LRRYPTGEER---CIACKLC 113


>01_06_1261 - 35826513-35828941,35829201-35829294
          Length = 840

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -3

Query: 569 VQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQLLCSGIQVRTELGKS 402
           ++L+++ ADT     DL+  S   +++ +EE   T+ S + L     +V  EL KS
Sbjct: 41  IKLIDIEADTFARKADLYFKSRPDLINHVEE---TYRSYQALADRYDRVSGELHKS 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,262,594
Number of Sequences: 37544
Number of extensions: 461039
Number of successful extensions: 1313
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)