Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_D18
(967 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 359 2e-99
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 359 2e-99
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 359 2e-99
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 44 1e-04
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 43 3e-04
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 5.0
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 5.0
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 29 6.5
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 29 6.5
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 359 bits (883), Expect = 2e-99
Identities = 174/214 (81%), Positives = 193/214 (90%)
Frame = +3
Query: 60 PPAVRLILXDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITD 239
PP DVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITD
Sbjct: 289 PPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITD 348
Query: 240 GQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG 419
GQIFLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG
Sbjct: 349 GQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG 408
Query: 420 SDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKE 599
SDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKE
Sbjct: 409 SDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKE 468
Query: 600 FTQHIKTSHQGLLSTIAKDGQITPESDASLKKIV 701
F H+++S Q LL TI ++GQI+P++DA LK +V
Sbjct: 469 FLAHLRSSQQALLKTIREEGQISPQTDAQLKDVV 502
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 47 LLRRPPGREAYPG 85
LLRRPPGREAYPG
Sbjct: 285 LLRRPPGREAYPG 297
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 359 bits (883), Expect = 2e-99
Identities = 174/214 (81%), Positives = 193/214 (90%)
Frame = +3
Query: 60 PPAVRLILXDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITD 239
PP DVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITD
Sbjct: 281 PPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITD 340
Query: 240 GQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG 419
GQIFLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG
Sbjct: 341 GQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG 400
Query: 420 SDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKE 599
SDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKE
Sbjct: 401 SDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKE 460
Query: 600 FTQHIKTSHQGLLSTIAKDGQITPESDASLKKIV 701
F H+++S Q LL TI ++GQI+P++DA LK +V
Sbjct: 461 FLAHLRSSQQALLKTIREEGQISPQTDAQLKDVV 494
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 47 LLRRPPGREAYPG 85
LLRRPPGREAYPG
Sbjct: 277 LLRRPPGREAYPG 289
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 359 bits (883), Expect = 2e-99
Identities = 174/214 (81%), Positives = 193/214 (90%)
Frame = +3
Query: 60 PPAVRLILXDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITD 239
PP DVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITD
Sbjct: 316 PPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITD 375
Query: 240 GQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG 419
GQIFLETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG
Sbjct: 376 GQIFLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFG 435
Query: 420 SDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKE 599
SDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKE
Sbjct: 436 SDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKE 495
Query: 600 FTQHIKTSHQGLLSTIAKDGQITPESDASLKKIV 701
F H+++S Q LL TI ++GQI+P++DA LK +V
Sbjct: 496 FLAHLRSSQQALLKTIREEGQISPQTDAQLKDVV 529
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 47 LLRRPPGREAYPG 85
LLRRPPGREAYPG
Sbjct: 312 LLRRPPGREAYPG 324
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/79 (32%), Positives = 46/79 (58%)
Frame = +3
Query: 111 LLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 290
+ ERA ++ + GS+T +P++ D++ IP IT+GQI+++ +L + I P
Sbjct: 314 IYERAGRVEGR--DGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPP 371
Query: 291 INVGLSVSRVGSAAQTKAM 347
INV S+SR+ +A + M
Sbjct: 372 INVLPSLSRLMKSAIGEGM 390
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/79 (31%), Positives = 46/79 (58%)
Frame = +3
Query: 111 LLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 290
+ ERA ++ + G S+T +P++ D++ IP IT+GQI+++ +L + I P
Sbjct: 326 IYERAGRVKGREG--SITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPP 383
Query: 291 INVGLSVSRVGSAAQTKAM 347
I+V S+SR+ +A + M
Sbjct: 384 IDVLPSLSRLMKSAVGEGM 402
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 409 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 513
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 409 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 513
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 503 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 384
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 688
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 503 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 384
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 687
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,726,223
Number of Sequences: 27780
Number of extensions: 346790
Number of successful extensions: 1113
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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