Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_D15
(982 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.035
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.046
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 0.078
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.19
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 5.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 7.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.035
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +2
Query: 755 TPXPXAPXPXLXPXXXVCRLXPPPXXXRGPPXXXXXXPPPPPPXP 889
TP P AP P P + PPP PP PPPPPP P
Sbjct: 743 TPAP-APIPVPPPAPIMGGPPPPPP----PPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 508 PXPXXVPXPXXXXXPXXRXXXPTPPXXXXXXAXPPPGSXXPP 633
P P P P P P PP A PPP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +3
Query: 510 PPXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRPPPXVPXTPGXHPXXXXPPXRXXXXQGS 689
PP P P+ P P P PPP P G P PP GS
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 690 R 692
R
Sbjct: 791 R 791
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 779 PXLXPXXXVCRLXPPPXXXRGPPXXXXXXPPPPPPXP 889
P P + P PP PPPPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 7.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 607 PPPGSXXPPXLIXPXXXXRPXPXXXRDLAPXSXXXPPXHLPAXXXXXXXHPPPXRP 774
PPP PP +I P P P AP PP P PPP P
Sbjct: 732 PPP---PPPAVIVPTPAPAPIPVPPP--APIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.046
Identities = 24/90 (26%), Positives = 24/90 (26%)
Frame = +3
Query: 507 PPPXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRPPPXVPXTPGXHPXXXXPPXRXXXXQG 686
PPP P S PS P P P P P P V P P PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPP-VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Query: 687 SRPXXXXXPXRAPARSXTXXXXXPPXLPPP 776
P P S P PP
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 31.5 bits (68), Expect = 0.19
Identities = 30/128 (23%), Positives = 35/128 (27%), Gaps = 2/128 (1%)
Frame = +1
Query: 523 VPXPXXXXXPXXRXXXPTPPXXXXXXAXP--PPGSXXPPXLIXPXXXXRPXPXXXRDLAP 696
VP P P + PP A P P PP + P P P
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Query: 697 XSXXXPPXHLPAXXXXXXXHPPPXRPRXXAXPPXXGVPXRPAXXKXPXXXXAAXVXPSPA 876
PP +P P P P GVP P + P + P P
Sbjct: 1154 APSGAPP--VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP-PV 1210
Query: 877 XXRSXXPP 900
S PP
Sbjct: 1211 PPPSTAPP 1218
Score = 29.5 bits (63), Expect = 0.76
Identities = 35/157 (22%), Positives = 40/157 (25%), Gaps = 1/157 (0%)
Frame = +1
Query: 430 PXXRPAXXPXXXWPPRXTXXVXXXSXPXPXXVPXPXXXXXPXXRXXXPTPPXXXXXXAXP 609
P P+ P P V S P P P P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 610 PPGSXXPPXLIXPXXXXRPXPXXXRDLAPXSXXXPPXHLPAXXXXXXXHPPPXRPRXXAX 789
P S PP P P P PP P+ PP
Sbjct: 1173 APSSGIPPV---------PKPAAGVPPVPPPSEAPPVPKPSVGVPPV---PPPSTAPPVP 1220
Query: 790 PPXXGVPXRPA-XXKXPXXXXAAXVXPSPAXXRSXXP 897
P G+P P K P + PS + RS P
Sbjct: 1221 TPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 29.5 bits (63), Expect = 0.76
Identities = 22/98 (22%), Positives = 24/98 (24%)
Frame = +3
Query: 507 PPPXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRPPPXVPXTPGXHPXXXXPPXRXXXXQG 686
P P P PS PP P+ P VP P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP-APSGAPPVPKPSVAAPPVPA 1173
Query: 687 SRPXXXXXPXRAPARSXTXXXXXPPXLPPPXXGXXPXP 800
P A P +P P G P P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 29.1 bits (62), Expect = 1.0
Identities = 23/99 (23%), Positives = 25/99 (25%), Gaps = 2/99 (2%)
Frame = +3
Query: 510 PPXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRPPP--XVPXTPGXHPXXXXPPXRXXXXQ 683
PP P S P P P P P P P VP P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 684 GSRPXXXXXPXRAPARSXTXXXXXPPXLPPPXXGXXPXP 800
P P AP+ +P P P P
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 507 PPPXAGPXSXXPSXPXPPXXXPNS--PXSXXXXXRPPPXVP 623
PPP P PS PP P++ P PP VP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.6 bits (51), Expect(3) = 0.078
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 869 PPPPPXPXLP 898
PPPPP P LP
Sbjct: 238 PPPPPPPTLP 247
Score = 23.4 bits (48), Expect(3) = 0.078
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 866 PPPPPPXP 889
PPPPPP P
Sbjct: 190 PPPPPPPP 197
Score = 21.4 bits (43), Expect(3) = 0.078
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 845 PXXXXXXPPPPPP 883
P PPPPPP
Sbjct: 184 PSDYNPPPPPPPP 196
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.19
Identities = 40/153 (26%), Positives = 43/153 (28%), Gaps = 8/153 (5%)
Frame = +2
Query: 527 PXPXAXXXXXXXGXPQLPPXXPXXXPXPPXGPXNPRXSSXXXXPXXPXXXL---PGISPL 697
P P G LPP P PP P + + P + P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPP--PRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
Query: 698 XPXXXXPXTCPLXXXXX*XTPXPXAPXPXLXPXXXVCRLXP--PPXXXRGPPXXXXXXPP 871
P P PL T P P P P L P PP G P PP
Sbjct: 395 IPGRSAPALPPLGNASR--TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA----PP 448
Query: 872 PPPP---XPXLPXXRWXGXXXXXXXXKPPPAXA 961
PP P LP PPPA A
Sbjct: 449 LPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/82 (24%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +3
Query: 489 RXGXXXPPPXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRP--PPXVPXTPGXHPXXXXPP 662
R PP + P P PP P++P S P P P P P P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Query: 663 XRXXXXQGSRPXXXXXPXRAPA 728
+ P P PA
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPPA 479
Score = 27.5 bits (58), Expect = 3.1
Identities = 32/138 (23%), Positives = 36/138 (26%), Gaps = 10/138 (7%)
Frame = +2
Query: 506 PPXLRXSPXPXAXXXXXXXGXPQLPPXXPXXXPXPPXGPXNPRXSSXXXXPXXPXXXLPG 685
PP + S P P +PP PP P P + P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP-IAPVSMNPAINSTSKP- 290
Query: 686 ISPLXPXXXXPXTCPLXXXXX*XTPXPXAP-----XPXLXPXXXVCRLXPPPXXXRGPPX 850
PL P L P P P + L PPP R
Sbjct: 291 --PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 851 XXXXXPP-----PPPPXP 889
PP PPPP P
Sbjct: 349 GSIPLPPQGRSAPPPPPP 366
Score = 25.8 bits (54), Expect = 9.3
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = +3
Query: 717 RAPARSXTXXXXXPPXLPPPXXGXXPXPWCAXSXRXXXXXXXXPXXXXXSLPRXXPXPXS 896
R P R + PP +PPP G P R P S P P P S
Sbjct: 240 RPPERVPSLSAPAPPPIPPPSNGTVSSP-PNSPPRPIAPVSMNPAINSTSKP-PLPPPSS 297
Query: 897 PXXDGXAXXXXXXXXSPPPP 956
PPPP
Sbjct: 298 RVSAAALAANKKRPPPPPPP 317
Score = 25.8 bits (54), Expect = 9.3
Identities = 28/130 (21%), Positives = 32/130 (24%), Gaps = 2/130 (1%)
Frame = +2
Query: 506 PPXLRXSPXPXAXXXXXXXGXPQLPPXXPXXXPXPPXGPXNPRXSSXXXXPXXPXXXLPG 685
PP R +P P G P PP P S P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 686 ISPLXPXXXXPXTCP--LXXXXX*XTPXPXAPXPXLXPXXXVCRLXPPPXXXRGPPXXXX 859
P+ P + P L P P L P + P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA-GMPAAPPLPPA 472
Query: 860 XXPPPPPPXP 889
PPP P P
Sbjct: 473 APAPPPAPAP 482
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 1.0
Identities = 23/95 (24%), Positives = 26/95 (27%)
Frame = +3
Query: 510 PPXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRPPPXVPXTPGXHPXXXXPPXRXXXXQGS 689
PP A S PP P P P +P P PP + S
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 690 RPXXXXXPXRAPARSXTXXXXXPPXLPPPXXGXXP 794
P P P PP +PPP P
Sbjct: 184 PPSAPSLPSAVP--------PMPPKVPPPPLSQAP 210
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +3
Query: 519 AGPXSXXPSXPX---PPXXXPNSPXSXXXXXRPPPXVPXTPGXHPXXXXPP 662
A P S P P PP +P PPP P P P PP
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +3
Query: 507 PPPXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRPP--PXVPXTPGXHPXXXXPPXRXXXX 680
P A P P+ P PP P P + PP P P P P R
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRSALL 1753
Query: 681 Q 683
Q
Sbjct: 1754 Q 1754
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +2
Query: 578 PPXXPXXXPXPPXGPXNPRXSSXXXXPXXPXXXLPGI 688
PP P P PP P P P P P +
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSV 1743
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 5.3
Identities = 23/109 (21%), Positives = 27/109 (24%), Gaps = 1/109 (0%)
Frame = +2
Query: 575 LPPXXPXXXPXPPXGPXNPRXSSXXXXPXXPXXXLPGISPLXPXXXXPXTCPL-XXXXX* 751
LPP P P P + P P L G + P P P
Sbjct: 210 LPPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIPNVLPFTAAQHFP 269
Query: 752 XTPXPXAPXPXLXPXXXVCRLXPPPXXXRGPPXXXXXXPPPPPPXPXLP 898
P + P PPP P P P P +P
Sbjct: 270 GMPAMPMMNVPMGPGGAPLVPPPPPGMVMASPSPAAATIPGAPVMPNIP 318
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 634 PGVXGTXGGGRXXXWXXXGELGXXXGGXGXXGXXXXGPAXGG 509
PG G GG R G G GG G G A GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PXAGPXSXXPSXPXPPXXXPNSPXSXXXXXRPPPXVPXT 629
P AGP S P+ PP P + P VP T
Sbjct: 1891 PKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLT 1929
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,043,874
Number of Sequences: 5004
Number of extensions: 29183
Number of successful extensions: 209
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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