Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D12
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       34   0.11 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.3  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 17/48 (35%), Positives = 17/48 (35%)
 Frame = +2

Query: 626 PPPXPXGGXGXKKKXPPPXXXGGGXXXXXXXXXGGGXXXEKXXPXGGG 769
           PP  P G  G     PP    GGG         GGG       P GGG
Sbjct: 117 PPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGG 164



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +2

Query: 632 PXPXGGXGXKKKXPPPXXXGGGXXXXXXXXXGGGXXXEKXXPXGGG 769
           P   GG G     PP    GGG         GGG    +    GGG
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGG 153



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/47 (36%), Positives = 17/47 (36%)
 Frame = +2

Query: 629 PPXPXGGXGXKKKXPPPXXXGGGXXXXXXXXXGGGXXXEKXXPXGGG 769
           PP P GG G     P     GGG         GGG       P GGG
Sbjct: 132 PPAPGGGGGGGA--PRRVLGGGGGGGALARPPGGGRGGALGRPPGGG 176



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/44 (34%), Positives = 16/44 (36%)
 Frame = +2

Query: 638 PXGGXGXKKKXPPPXXXGGGXXXXXXXXXGGGXXXEKXXPXGGG 769
           P GG G     PP    GGG         GGG    +    GGG
Sbjct: 161 PGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGG 204



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +2

Query: 638 PXGGXGXKKKXPPPXXXGGGXXXXXXXXXGGGXXXEKXXPXGGG 769
           P GG        PP   GGG         GGG       P GGG
Sbjct: 160 PPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGG 203



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/46 (36%), Positives = 18/46 (39%)
 Frame = +2

Query: 632 PXPXGGXGXKKKXPPPXXXGGGXXXXXXXXXGGGXXXEKXXPXGGG 769
           P P GG G +   PP    GGG         GGG       P GGG
Sbjct: 98  PGPLGGGGAR---PPGG-GGGGGPPSLPPGAGGGGGARPPAPGGGG 139


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 626  PPPXPXGGXGXKKKXPPPXXXGGG 697
            PPP P GG G     PPP    GG
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGG 1172



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
 Frame = +2

Query: 626  PPPXPXGGXGXKKKXP-PPXXXGGGXXXXXXXXXGGGXXXEKXXPXG 763
            PPP P GG G  +  P PP   G G         G G       P G
Sbjct: 1122 PPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAG 1168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,329,187
Number of Sequences: 37544
Number of extensions: 237285
Number of successful extensions: 490
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)