Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D11
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722...    29   4.0  
02_04_0636 - 24648288-24648740,24648902-24649049,24650165-24650703     29   7.0  
09_02_0181 - 5425833-5426527,5426667-5429397                           28   9.2  

>12_02_0030 +
           12469707-12469902,12470337-12470658,12472208-12472245,
           12472486-12473573
          Length = 547

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 120 MWLGSRGPGCDGRRRPATSLGLWTGRAY*RDSPRRLATRQT 242
           +W G    G  GRRR A+S   W   A  R   RR A R++
Sbjct: 123 LWAGGAARGGFGRRRGASSTHAWRPGAGRRKGRRRAARRRS 163


>02_04_0636 - 24648288-24648740,24648902-24649049,24650165-24650703
          Length = 379

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = -3

Query: 327 SCLNIYLR*FVIYHIIQSSK*SPPLWICAFVWSRVVEASHVSXRGQSRGRATSLDAAGRR 148
           +CL+  +   V Y  +  ++ SPP  +CA  W R  +   V+    S G    L      
Sbjct: 271 ACLDPAMDVAVAYRGLALARASPPPRVCARGWGRTEQVPVVA----SSGNGVRLPG---- 322

Query: 147 IRAHATPATCWGGRVA 100
              H   A  WGG VA
Sbjct: 323 FALHGLEADAWGGAVA 338


>09_02_0181 - 5425833-5426527,5426667-5429397
          Length = 1141

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = +1

Query: 55   GTRGSAAGLVPGXPACNAXAPTCGWGRVGPDATAGGVQRRRSASGLAA 198
            G  GS  G   G P   +  PT G GR G     GGV   R    L A
Sbjct: 995  GDGGSTWGGGSGAPMAGSGFPTHGSGRRGERRDGGGVGGERRVRALPA 1042


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,248,566
Number of Sequences: 37544
Number of extensions: 388733
Number of successful extensions: 1187
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)