Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_D08
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 0.28
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 0.28
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 0.29
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 1.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect(2) = 1.7
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 703 PPPPPPPXXGG 735
PPPPPPP GG
Sbjct: 769 PPPPPPPPPGG 779
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 703 PPPPPPPXXG 732
PPPPPPP G
Sbjct: 758 PPPPPPPPGG 767
Score = 25.0 bits (52), Expect(3) = 0.28
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 706 PPPPPPXXGG 735
PPPPPP GG
Sbjct: 758 PPPPPPPPGG 767
Score = 23.8 bits (49), Expect(3) = 1.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 703 PPPPPPP 723
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(3) = 0.28
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 703 PPPPPPP 723
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 1.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 706 PPPPPPXXGGXF 741
PPPPPP G F
Sbjct: 769 PPPPPPPPPGGF 780
Score = 22.6 bits (46), Expect(3) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 706 PPPPPPXXG 732
PPPPPP G
Sbjct: 726 PPPPPPPGG 734
Score = 22.6 bits (46), Expect(3) = 1.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 706 PPPPPPXXG 732
PPPPPP G
Sbjct: 742 PPPPPPPGG 750
Score = 22.2 bits (45), Expect(3) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 709 PPPPPXXGG 735
PPPPP GG
Sbjct: 742 PPPPPPPGG 750
Score = 21.0 bits (42), Expect(3) = 0.28
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 853 PPPPPXPLXF 882
PPPPP P F
Sbjct: 771 PPPPPPPGGF 780
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 853 PPPPPXPLXF 882
PPPPP P F
Sbjct: 784 PPPPPPPGMF 793
Score = 20.6 bits (41), Expect(3) = 4.3
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 853 PPPPPXP 873
PPPPP P
Sbjct: 758 PPPPPPP 764
Score = 20.6 bits (41), Expect(3) = 1.6
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 853 PPPPPXP 873
PPPPP P
Sbjct: 770 PPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect(2) = 1.7
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 703 PPPPPPPXXGG 735
PPPPPPP GG
Sbjct: 769 PPPPPPPPPGG 779
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 703 PPPPPPPXXG 732
PPPPPPP G
Sbjct: 758 PPPPPPPPGG 767
Score = 25.0 bits (52), Expect(3) = 0.28
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 706 PPPPPPXXGG 735
PPPPPP GG
Sbjct: 758 PPPPPPPPGG 767
Score = 23.8 bits (49), Expect(3) = 1.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 703 PPPPPPP 723
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(3) = 0.28
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 703 PPPPPPP 723
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 1.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 706 PPPPPPXXGGXF 741
PPPPPP G F
Sbjct: 769 PPPPPPPPPGGF 780
Score = 22.6 bits (46), Expect(3) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 706 PPPPPPXXG 732
PPPPPP G
Sbjct: 726 PPPPPPPGG 734
Score = 22.6 bits (46), Expect(3) = 1.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 706 PPPPPPXXG 732
PPPPPP G
Sbjct: 742 PPPPPPPGG 750
Score = 22.2 bits (45), Expect(3) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 709 PPPPPXXGG 735
PPPPP GG
Sbjct: 742 PPPPPPPGG 750
Score = 21.0 bits (42), Expect(3) = 0.28
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 853 PPPPPXPLXF 882
PPPPP P F
Sbjct: 771 PPPPPPPGGF 780
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 853 PPPPPXPLXF 882
PPPPP P F
Sbjct: 784 PPPPPPPGMF 793
Score = 20.6 bits (41), Expect(3) = 1.6
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 853 PPPPPXP 873
PPPPP P
Sbjct: 758 PPPPPPP 764
Score = 20.6 bits (41), Expect(3) = 4.3
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 853 PPPPPXP 873
PPPPP P
Sbjct: 759 PPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect(2) = 1.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 703 PPPPPPPXXGG 735
PPPPPPP GG
Sbjct: 352 PPPPPPPPPGG 362
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 703 PPPPPPPXXG 732
PPPPPPP G
Sbjct: 341 PPPPPPPPGG 350
Score = 25.0 bits (52), Expect(3) = 0.29
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 706 PPPPPPXXGG 735
PPPPPP GG
Sbjct: 341 PPPPPPPPGG 350
Score = 23.8 bits (49), Expect(3) = 1.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 703 PPPPPPP 723
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(3) = 0.29
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 703 PPPPPPP 723
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 706 PPPPPPXXGGXF 741
PPPPPP G F
Sbjct: 352 PPPPPPPPPGGF 363
Score = 22.6 bits (46), Expect(3) = 4.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 706 PPPPPPXXG 732
PPPPPP G
Sbjct: 309 PPPPPPPGG 317
Score = 22.6 bits (46), Expect(3) = 1.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 706 PPPPPPXXG 732
PPPPPP G
Sbjct: 325 PPPPPPPGG 333
Score = 22.2 bits (45), Expect(3) = 4.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 709 PPPPPXXGG 735
PPPPP GG
Sbjct: 325 PPPPPPPGG 333
Score = 21.0 bits (42), Expect(3) = 0.29
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 853 PPPPPXPLXF 882
PPPPP P F
Sbjct: 354 PPPPPPPGGF 363
Score = 21.0 bits (42), Expect(2) = 1.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 853 PPPPPXPLXF 882
PPPPP P F
Sbjct: 367 PPPPPPPGMF 376
Score = 20.6 bits (41), Expect(3) = 1.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 853 PPPPPXP 873
PPPPP P
Sbjct: 341 PPPPPPP 347
Score = 20.6 bits (41), Expect(3) = 4.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 853 PPPPPXP 873
PPPPP P
Sbjct: 353 PPPPPPP 359
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect(2) = 2.3
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 703 PPPPPPPXXGG 735
PPPPPPP GG
Sbjct: 578 PPPPPPPMLGG 588
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 706 PPPPPPXXGG 735
PPPPPP GG
Sbjct: 589 PPPPPPPPGG 598
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 703 PPPPPPP 723
PPPPPPP
Sbjct: 561 PPPPPPP 567
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 853 PPPPPXP 873
PPPPP P
Sbjct: 590 PPPPPPP 596
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 702 PPPPPPPXXGGXF 740
PPPPPPP GG +
Sbjct: 39 PPPPPPPPCGGGY 51
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 703 PPPPPPPXXGGXF 741
PPPPPPP GG +
Sbjct: 39 PPPPPPPPCGGGY 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,621,640
Number of Sequences: 27780
Number of extensions: 157306
Number of successful extensions: 5382
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3365
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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