Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_D04
(934 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 36 0.035
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 34 0.14
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 0.33
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 33 0.43
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.57
02_01_0302 - 2021221-2023305 31 1.3
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 30 2.3
04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800 30 2.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.0
11_06_0610 - 25449085-25453284 29 5.3
07_03_0177 - 14770777-14772045 29 7.0
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 28 9.2
09_02_0327 - 7284829-7284889,7284946-7286126 28 9.2
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 28 9.2
03_06_0297 - 32924162-32924605 28 9.2
03_02_0765 + 11000724-11002496 28 9.2
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 36.3 bits (80), Expect = 0.035
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +1
Query: 448 GPXPXPPPXTPG-PRXXGXGXGFXPPQGGXSXXPQXRGXPXXKXFDQRXPKGPPTLKR 618
GP P PPP P PR G G G PP G G P +GPP K+
Sbjct: 348 GPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRG--GGGPPPPALPGGPRARGPPPFKK 403
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 457 PXPPPXTPGPRXXGXGXGFXPP 522
P PPP P P G G G PP
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPP 352
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 400 GLXXPPXPRXXXXXFXGPXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRGXPXXK 573
G PP P P P P P P P G PP P+ RG P K
Sbjct: 346 GSGPPPPPPPAAPAAPRP-PGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPFK 402
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/64 (31%), Positives = 24/64 (37%)
Frame = +1
Query: 415 PXPRXXXXXFXGPXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRGXPXXKXFDQRXP 594
P P+ F P P PPP P P G PPQ Q + P + + Q P
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQ-------QQQPPPPPQMYYQPPP 94
Query: 595 KGPP 606
PP
Sbjct: 95 PPPP 98
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect(2) = 0.33
Identities = 18/68 (26%), Positives = 18/68 (26%)
Frame = +1
Query: 463 PPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRGXPXXKXFDQRXPKGPPTLKRXXXXGFSX 642
PPP P P G F PP P P PP L
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPP 604
Query: 643 XXPPPXXL 666
PPP L
Sbjct: 605 PPPPPPIL 612
Score = 23.8 bits (49), Expect(2) = 0.33
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 748 PXXPPLFXPGRXRKTXPPFXLXEXGAFSLTPXXWFPPPX*XPPPXLXCFXXPP 906
P PP P R PP S+ P PPP PPP L PP
Sbjct: 605 PPPPPPILPNRSVPPPPP-PPPPLPNHSVLP----PPPPPPPPPSLPNRLVPP 652
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 32.7 bits (71), Expect = 0.43
Identities = 27/75 (36%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Frame = -3
Query: 884 KXGGGX*XGGGNHXXGVREKAPXSXRXKGGXVFRXRPGXKRGGXXGXFPG------XXXG 723
K GGG GGGN G+ R G V G GG G FPG G
Sbjct: 284 KGGGGG--GGGNTGGGIGGSTGGGGRGAGAGV-----GGITGGGDGGFPGGGGGGFSGGG 336
Query: 722 XX*XPGGGCPX*NGG 678
PGGGC GG
Sbjct: 337 GGGFPGGGCGGITGG 351
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.57
Identities = 21/65 (32%), Positives = 24/65 (36%)
Frame = +3
Query: 516 PPPRGXXXFXPXXGXTPXKXF*PKXPKRXPXPKKXXXXGFFXXAPPPXXAXKNSPPISXG 695
PPP+G P G P PK P P P G PPP + PP + G
Sbjct: 339 PPPKGPPPPPPAKGPPPPPP--PKGPSPPPPPPPGGKKG--GPPPPPPKGGASRPPAAPG 394
Query: 696 ATPPG 710
P G
Sbjct: 395 -VPTG 398
Score = 32.3 bits (70), Expect = 0.57
Identities = 23/66 (34%), Positives = 25/66 (37%)
Frame = +1
Query: 367 PXPGGXXXXFXGLXXPPXPRXXXXXFXGPXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXP 546
P P G PP P GP P PPP PG + G PP+GG S P
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPK-----GPSPPPPPP-PGGKKGGPPP--PPPKGGASRPP 390
Query: 547 QXRGXP 564
G P
Sbjct: 391 AAPGVP 396
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 412 PPXPRXXXXXFXGPXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRG 558
PP P P P PPP P G PP G P +G
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG 361
>02_01_0302 - 2021221-2023305
Length = 694
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 367 PXPGGXXXXFXGLXXPPXPRXXXXXFXGPXPXPPPXTPGPRXXGXGXGFXPPQG 528
P PGG G PP P GP P PP +P P + P G
Sbjct: 387 PTPGGSPGR--GGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPG 438
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +1
Query: 724 PXXXPGKXPXXPPLFXPGRXRKTXPPFXLXEXGAFSLTPXXWFPPPX*XPPPXLXCFXXP 903
P P P P + P P LTP PP PPP L P
Sbjct: 32 PPSLPTTTPPAPTVVAPPLPTTPPPAVVAPSPPLPPLTPPPAIVPPALPPPPPLPAIVVP 91
Query: 904 PXXP 915
P P
Sbjct: 92 PALP 95
>04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800
Length = 456
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 808 LXEXGAFSLTPXXWFPPPX*XPPPXLXCFXXPPXXPDRLA 927
L + AFS +P FPPP P PP P R A
Sbjct: 49 LLDFSAFSASPRPAFPPPTAGAPANASALSAPPRAPVRTA 88
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 400 GLXXPPXPRXXXXXFXGPXPXPPPXTPGPRXXGXGXGFXPPQGG 531
G+ PP P GP P PP P G G PP GG
Sbjct: 1181 GVAPPPPPPRGHGGVGGP-PTPPGAPAPPMPPGVPGGPPPPPGG 1223
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 5.3
Identities = 25/100 (25%), Positives = 32/100 (32%), Gaps = 7/100 (7%)
Frame = +3
Query: 447 GPXPVXPXXXXXXPXXRXGXXVSPP----PRGXXXFXPXXGXTPX---KXF*PKXPKRXP 605
G P P P G SPP P G P +P + + P PK P
Sbjct: 553 GKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKSTP 612
Query: 606 XPKKXXXXGFFXXAPPPXXAXKNSPPISXGATPPGXLXXP 725
+K + PP A + P +TPP P
Sbjct: 613 PAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPP 652
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +3
Query: 582 PKXPKRXPXPKKXXXXGFFXXAPPPXXAXKN--SPPISXGATPP 707
P+ P P P APPP A K SPP GA PP
Sbjct: 472 PEEPTPSPTPSSPESPA--KMAPPPAPAIKGVTSPPAEYGAPPP 513
>07_03_0177 - 14770777-14772045
Length = 422
Score = 28.7 bits (61), Expect = 7.0
Identities = 30/90 (33%), Positives = 32/90 (35%), Gaps = 1/90 (1%)
Frame = -3
Query: 914 G*XGGFXKQXKXGGGX*XGGGNHXXGVREKAPXSXRXKGGXVFRXRPGXKRGGXXGXF-P 738
G GGF K GGG GGG G KGG + K GG G F
Sbjct: 292 GIGGGFGKGGGLGGGGGLGGGGGLGG--GSGLGGGIGKGGGL--GGSFGKGGGLGGGFGK 347
Query: 737 GXXXGXX*XPGGGCPX*NGGXIFXSXXGGG 648
G G GGG GG + GGG
Sbjct: 348 GGGIGGGFGKGGGLG--GGGGLGGGGGGGG 375
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 451 PXPXPPPXTPGPRXXGXGXGFXPPQGG 531
P P PPP +P PR G P GG
Sbjct: 340 PSPPPPPTSPSPRQH-RGWAIFAPHGG 365
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/54 (25%), Positives = 18/54 (33%)
Frame = +1
Query: 451 PXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRGXPXXKXFDQRXPKGPPTL 612
P P PPP P P + G P P ++ P PP+L
Sbjct: 53 PPPPPPPPPPPPPPPRGRRYYRRVSGDDLDVPSCSSSPSPPSDEENPPPNPPSL 106
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 28.3 bits (60), Expect = 9.2
Identities = 26/96 (27%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Frame = +3
Query: 414 AXPPGXXXXXXGPXPVXPXXXXXXPXXRXGXXVSPPPRGXXXFXPXXGXTPXKXF*PKXP 593
A PP GP P P +PPP+G P P P+ P
Sbjct: 62 AAPPAAIAGYRGPPPPQRPFGAGPPQQGPFAAAAPPPQGPFTSAP-SSQGPFAAA-PQPP 119
Query: 594 KRXP-XPKKXXXXGFFXXAPPPXXA-XKNSPPISXG 695
+ P G F APPP +PP S G
Sbjct: 120 SQGPFGTAPPPSQGPFGTAPPPSQGPFGTAPPPSQG 155
>03_06_0297 - 32924162-32924605
Length = 147
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +1
Query: 451 PXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRGXPXXKXFDQRXPKGPP 606
P P P TPGP G PP P+ P K + P+ PP
Sbjct: 79 PMPPPGAPTPGPEQPGPSIP-SPPMPEVPDVPRNPDVPPPKPPELDPPRPPP 129
>03_02_0765 + 11000724-11002496
Length = 590
Score = 28.3 bits (60), Expect = 9.2
Identities = 27/89 (30%), Positives = 28/89 (31%)
Frame = -3
Query: 914 G*XGGFXKQXKXGGGX*XGGGNHXXGVREKAPXSXRXKGGXVFRXRPGXKRGGXXGXFPG 735
G GG GGG GGG G GG F G GG G G
Sbjct: 76 GGFGGGKGGGLGGGGGLGGGGGAGGGFGGGLGHGGGLGGG--FGGGKGGGLGGGGGLGGG 133
Query: 734 XXXGXX*XPGGGCPX*NGGXIFXSXXGGG 648
G GGG GG + GGG
Sbjct: 134 AGGGGGLGSGGGLGGGAGGGLGGGAGGGG 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,527,719
Number of Sequences: 37544
Number of extensions: 372900
Number of successful extensions: 1720
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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