Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_D04
         (934 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.35 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 22/67 (32%), Positives = 24/67 (35%)
 Frame = -3

Query: 878 GGGX*XGGGNHXXGVREKAPXSXRXKGGXVFRXRPGXKRGGXXGXFPGXXXGXX*XPGGG 699
           GGG   G G+    +R  A      K   V    PG   GG  G  PG   G    PG G
Sbjct: 172 GGGGGGGAGSFAAALRNLA------KQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPG 225

Query: 698 CPX*NGG 678
                GG
Sbjct: 226 GGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 19/73 (26%), Positives = 19/73 (26%)
 Frame = +1

Query: 448 GPXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRGXPXXKXFDQRXPKGPPTLKRXXX 627
           GP   PPP  PG         F PP       P     P    F    P  P        
Sbjct: 526 GPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAP 585

Query: 628 XGFSXXXPPPXXL 666
                  PPP  L
Sbjct: 586 PPPPPMGPPPSPL 598


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +1

Query: 448 GPXPXPPPXTPGPRXXGXGXGFXPPQGGXSXXPQXRGXP 564
           GP    PP   GP   G      PP+ G    PQ  G P
Sbjct: 188 GPQMMRPPGNVGPPRTGTPTQPQPPRPG-GMYPQPPGVP 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,424
Number of Sequences: 2352
Number of extensions: 8731
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)