Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_C24
(1312 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 36 0.084
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 33 0.34
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.59
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 1.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 1.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.8
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 31 2.4
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 31 2.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 2.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 3.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 26 3.5
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 30 4.2
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.5
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 5.5
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 29 7.3
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 29 9.6
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 29 9.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 9.6
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 9.6
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 29 9.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 9.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 9.6
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.5 bits (78), Expect = 0.084
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +3
Query: 132 PSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPP 251
P P P P+ PP P P P P P + P PP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/74 (31%), Positives = 29/74 (39%)
Frame = +2
Query: 119 LNPTPLGXPSTPXXXPPPPLXPXLSFXSXLTXPXNPXSSXLFSPXXTHXXKXSXFXQTXQ 298
L P+P+ P+ P PPL P S + LT P L P + QT
Sbjct: 220 LQPSPVRFPAQPWQI--PPLHPHQSTPNPLTQFFQPIPQHLIPPPNPFFPQQ---HQTWT 274
Query: 299 XPLLXTXSPXTPPP 340
P L +P PPP
Sbjct: 275 PPTLLQPNPIPPPP 288
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.59
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 123 TQPPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSP 248
T PP + P P+ PP P SP P P P SP
Sbjct: 149 TPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSP 190
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 129 PPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPP 251
PP P P P PPP P P SP P P P
Sbjct: 142 PPPRVPRTPPPRSPPPRRP--PMTPPSPQRRPPRTPPSPEP 180
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 159 PLXPPPXXPXSXSLPXSPXPXTPXLXPXSP 248
P PPP P + P SP P P + P SP
Sbjct: 139 PPPPPPRVPRTPP-PRSPPPRRPPMTPPSP 167
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 8/67 (11%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGG--------GXXGXGXRGXAEGGWVKXXXXXXXX 95
GG+ G + G G + G + G GG G G G RG GGW +
Sbjct: 212 GGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRGSRWGWGR 271
Query: 94 IXLXGWG 74
GWG
Sbjct: 272 PSWGGWG 278
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGGWVKXXXXXXXXIXLXGWGX 71
GG G R G G G G G G G G G G GGW GWG
Sbjct: 54 GGRGGGRGG-SGGGRGGGSG-GGRGGSGGAGAGGSGSGSGGW----GGQDGGSSAGGWGG 107
Query: 70 XNXXXRGG 47
+GG
Sbjct: 108 SQGGSQGG 115
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGGW 125
GG+ G + G G G + G G G G +G ++GGW
Sbjct: 188 GGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGW 229
Score = 30.3 bits (65), Expect = 3.1
Identities = 29/115 (25%), Positives = 36/115 (31%), Gaps = 1/115 (0%)
Frame = -3
Query: 446 GXGG-GGXXXGXXXXXXXXGEXXXXGEFXFXGWXVXXGXXXGVRXXGGEGXVXFGRXKXI 270
G GG GG G G G G G + G +G
Sbjct: 131 GQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQ 190
Query: 269 XGNEXGRGRXGXKXXGXXXW*GGKXXRXRGXGGGXEXXXX*RGGRGGLG*GXXXG 105
GN+ G G G G GG+ G GG + +GG+ G G G G
Sbjct: 191 GGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQG 245
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGG 128
GG G G G G G G GGG G G RG GG
Sbjct: 87 GGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
Score = 29.1 bits (62), Expect = 7.3
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = -3
Query: 266 GNEXGRGRXGXKXXGXXXW*GGKXXRXRGXGGGXEXXXX*RGGRGGLG*GXXXG 105
GN G G G G GG R G GGG GGRGG G G G
Sbjct: 79 GNWGGNGGGGNGGGGRGGGGGGGGGRG-GGGGGRGGGGGGGGGRGGGGGGRGGG 131
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGG 128
GG G G G G G G GGG G G G GG
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGG 128
GG G G G G G GGG G G G GG
Sbjct: 66 GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = +3
Query: 48 PPLXXXFXXPXPXNXIXXXSXXXXLTQPPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTP 227
PP+ P P + + PP P P PPP P P P P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 228 XLXPXSPP 251
PP
Sbjct: 778 GGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = +3
Query: 48 PPLXXXFXXPXPXNXIXXXSXXXXLTQPPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTP 227
PP+ P P + + PP P P PPP P P P P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 228 XLXPXSPP 251
PP
Sbjct: 778 GGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = +3
Query: 48 PPLXXXFXXPXPXNXIXXXSXXXXLTQPPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTP 227
PP+ P P + + PP P P PPP P P P P P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPP 360
Query: 228 XLXPXSPP 251
PP
Sbjct: 361 GGFKGGPP 368
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +3
Query: 126 QPPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPPXXLIXXNXLXSXKXXXPL 305
Q P P+ PL PP P P TP P PP + + P
Sbjct: 87 QEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTP---PQCPPPPVPHPPQITQMAPILPT 143
Query: 306 SSXPPHPXXXP 338
S PP P P
Sbjct: 144 SPAPPPPIPHP 154
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGG 128
GG G R G G G+ G G G G G G GG
Sbjct: 116 GGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGG 156
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 250 GGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGGW 125
GG G G G G G G GGG G G G +GG+
Sbjct: 142 GGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGY 183
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = -1
Query: 262 MSXXGGEXG*RXGVXGXGEXGXEXEXGXXGGGXXGXGXRGXAEGG 128
M GG G R G G G G + G GGG G RG GG
Sbjct: 312 MGGRGGFGGDRGGYGGGGGRGG-FDGGRGGGGGFRGGDRGGFRGG 355
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.8 bits (54), Expect(2) = 3.5
Identities = 29/108 (26%), Positives = 31/108 (28%), Gaps = 5/108 (4%)
Frame = +3
Query: 129 PPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXL--XPXS---PPXXLIXXNXLXSXKX 293
P S PL PPP P +P P P L P S PP + S
Sbjct: 476 PSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGA 535
Query: 294 XXPLSSXPPHPXXXPXXYXPTXKXKLPXXLXLPXXXXXLXXPXXXPPP 437
P PP P P LP L P PPP
Sbjct: 536 PTP----PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP 579
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 513 PXXXPPTPPPPXXXXTF 563
P PP PPPP F
Sbjct: 573 PGGPPPPPPPPPPSFMF 589
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -3
Query: 206 GGKXXRXRGXGGGXEXXXX*RGGRGGLG*GXXXG 105
GG+ RG GG RGGRGG G G G
Sbjct: 151 GGRGRGGRGRGGDRGGRGSDRGGRGGFGRGGGGG 184
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 129 PPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPPXXL 260
P P+ P+ PPP S +P P P + P +P L
Sbjct: 131 PAVIPPVVTQPIVPPPVPEVSEPVPEPPIPAPGPVAPPTPSGPL 174
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +3
Query: 129 PPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPP 251
PP P PPP P P P P + + P PP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 129 PPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTP 227
PPS+ P P PP P +P P P P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +3
Query: 129 PPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPP 251
PP P PPP P P P P + + P PP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 129 PPSAXPLXPXPLXPPPXXPXSXSLPXSPXPXTP 227
PPS+ P P PP P +P P P P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = -3
Query: 356 GWXVXXGXXXGVRXXGGEGXVXFGRXKXIXGNEXGRGRXGXKXXGXXXW*GGKXXRXRGX 177
G+ G G R + G + G+ G R G G + GG RG
Sbjct: 491 GFRGGGGDRGGFRGRSSDRGGDRGGFRGRSGDRDGGFRGGFGGRGGGGFRGGDRGGFRGR 550
Query: 176 GGGXEXXXX*RGGRGG 129
GGG RGGRGG
Sbjct: 551 GGGGGF----RGGRGG 562
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 29.1 bits (62), Expect = 7.3
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 81 PXNXIXXXSXXXXLTQPPSAXPLXPXPLXPPPXXP 185
P S +T PP A PL P PPP P
Sbjct: 222 PSENAVVDSPQPFVTSPPPAQPLFPQQTPPPPASP 256
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3
Query: 305 EGXVXFGRXKXIXGNEXGRGRXGXKXXGXXXW*GGKXXRXRGXGGGXEXXXX*RGGRGGL 126
+G F G GRG G G GG G GGG RGGRGG
Sbjct: 659 KGFGQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGD------RGGRGGY 712
Query: 125 G 123
G
Sbjct: 713 G 713
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3
Query: 305 EGXVXFGRXKXIXGNEXGRGRXGXKXXGXXXW*GGKXXRXRGXGGGXEXXXX*RGGRGGL 126
+G F G GRG G G GG G GGG RGGRGG
Sbjct: 700 KGFGQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGD------RGGRGGY 753
Query: 125 G 123
G
Sbjct: 754 G 754
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 9.6
Identities = 29/116 (25%), Positives = 31/116 (26%), Gaps = 2/116 (1%)
Frame = -3
Query: 446 GXGGGGXXXGXXXXXXXXGEXXXXG--EFXFXGWXVXXGXXXGVRXXGGEGXVXFGRXKX 273
G GGG G G G GW G G G +G
Sbjct: 24 GWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGG 83
Query: 272 IXGNEXGRGRXGXKXXGXXXW*GGKXXRXRGXGGGXEXXXX*RGGRGGLG*GXXXG 105
G+ G G G G W G GGG G GG G G G
Sbjct: 84 GRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGG 139
Score = 28.7 bits (61), Expect = 9.6
Identities = 35/110 (31%), Positives = 35/110 (31%)
Frame = -3
Query: 446 GXGGGGXXXGXXXXXXXXGEXXXXGEFXFXGWXVXXGXXXGVRXXGGEGXVXFGRXKXIX 267
G GGGG G G GW G G R GG G
Sbjct: 95 GRGGGGRGDWGGNNNGGGGNWGGGGNND-GGWGGNNGGGGGGRGGGGRGG---------- 143
Query: 266 GNEXGRGRXGXKXXGXXXW*GGKXXRXRGXGGGXEXXXX*RGGRGGLG*G 117
GRG G G W GG RG GGG RGG GG G G
Sbjct: 144 ---DGRGPPGSN--GGGDW-GGNGGGGRGGGGG-------RGGGGGGGAG 180
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +3
Query: 126 QPPS--AXPLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPP 251
+PP PL P P P P P + P P L P PP
Sbjct: 123 RPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPP 166
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3
Query: 305 EGXVXFGRXKXIXGNEXGRGRXGXKXXGXXXW*GGKXXRXRGXGGGXEXXXX*RGGRGGL 126
+G F G GRG G G GG G GGG RGGRGG
Sbjct: 659 KGFGQFAPTSSAYGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGD------RGGRGGY 712
Query: 125 G 123
G
Sbjct: 713 G 713
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 144 PLXPXPLXPPPXXPXSXSLPXSPXPXTPXLXPXSPP 251
P P P PP P +L P P P P PP
Sbjct: 686 PGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPP 721
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 153 PXPLXPPPXXPXSXS-LPXSPXPXTPXLXPXSPP 251
P P PPP P + S P P P P L PP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,823,947
Number of Sequences: 27780
Number of extensions: 160683
Number of successful extensions: 1934
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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