Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_C23
         (932 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    24   7.6  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   7.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   7.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   7.6  

>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 730 TAQGQVVHASHSQLSRPH 677
           TAQ Q+ H  HS ++ PH
Sbjct: 68  TAQHQLHHQGHSPVASPH 85


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -2

Query: 805 SLTTC--NMSYFSCYNYFHKXIRR 740
           SLT C  N+  +S YN FH  + R
Sbjct: 331 SLTICFGNVMMYSSYNRFHNNVYR 354


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -2

Query: 805 SLTTC--NMSYFSCYNYFHKXIRR 740
           SLT C  N+  +S YN FH  + R
Sbjct: 331 SLTICFGNVMMYSSYNRFHNNVYR 354


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 623 MLVKCLWA*GIQQLLILRVRSG*LAVGSMDNLAL 724
           ML   LW  G   +L L +  G  AVG +D+LA+
Sbjct: 635 MLGPRLWNVGYDGVLRLELPEGAQAVGFVDDLAI 668


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 958,353
Number of Sequences: 2352
Number of extensions: 19852
Number of successful extensions: 65
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)