Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_C21
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1188 + 26801833-26802225                                         29   3.9  
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313...    29   5.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   9.0  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     28   9.0  

>12_02_1188 + 26801833-26802225
          Length = 130

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -3

Query: 702 GEKGGQVSGKRQGRNRRAHEGVSRGKTP 619
           G  GG  SGKR      AHEGV  G  P
Sbjct: 30  GGGGGGSSGKRSSSAAAAHEGVPEGHVP 57


>08_01_0356 +
           3131214-3132443,3132584-3132778,3132892-3132972,
           3133324-3133383,3133466-3133560,3133660-3133816,
           3133896-3134021,3134398-3134478,3134557-3134647,
           3134735-3134868,3135068-3135136,3135219-3135308,
           3135405-3135508,3135594-3135762,3136066-3136134
          Length = 916

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 713 RFPKGRKADRYPVSGRVGTGERTREFPGGKRLVSYSP 603
           R PK    D  P+S R+  GE ++  P  K +V  SP
Sbjct: 297 REPKADDNDNVPLSQRLKMGESSKSKPPAKNIVKKSP 333


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 303 NESAN---ARGEAVCVLGALPLPRSLTRCAR 386
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 684 VSGKRQGRNRRAHEGVSRGKTP 619
           +  +R+GR R AHEG+  G  P
Sbjct: 91  IEAERRGRRRNAHEGIKIGAEP 112


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
 Frame = +3

Query: 354 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKXSKRPXTV 509
           P PRS  RC      GCG R Q TQR     P N  IT   E TC    +  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,739,317
Number of Sequences: 37544
Number of extensions: 434470
Number of successful extensions: 1161
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)