Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_C20
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 248 6e-66
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 248 6e-66
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 134 5e-60
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical... 31 1.5
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 29 3.5
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 29 4.6
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 29 4.6
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 29 4.6
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 28 8.1
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 28 8.1
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 8.1
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 28 8.1
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 248 bits (606), Expect = 6e-66
Identities = 124/202 (61%), Positives = 144/202 (71%), Gaps = 5/202 (2%)
Frame = +2
Query: 161 GAAVGLPLTDEEAAVCMVAG-----ELSXXXXXXXXXXXXXXMSSFGDFVALSDPCDVST 325
GAAVGLPL + EAA CMV+ + MSSFGDF+ALS+ CD T
Sbjct: 142 GAAVGLPLNETEAACCMVSDLPIDTKKPSLAAAYARARGADRMSSFGDFIALSEKCDELT 201
Query: 326 ATIISREVSDGVIAPGYSPEALKLLSKKKGGNYCVLKIDPTYEPNLMEQKTIFGLTLEQK 505
A II+REVSDGV+AP + P AL LL+KKK GNYCVLKI+P Y P+ E++T+FGL L QK
Sbjct: 202 AKIINREVSDGVVAPDFDPAALSLLAKKKNGNYCVLKINPNYLPSETEERTVFGLRLRQK 261
Query: 506 RNDAKITAELFKNVVTTKKDLPSNAVRDLIVATIALKYTQSNSVCFARDGQVIGIGAGQQ 685
RN+A I AE F NVV + +L A+ DLIVATIALKY QSNSVCFA GQVIG+GAGQQ
Sbjct: 262 RNNAVINAETFNNVVGSANELNKQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQ 321
Query: 686 SRIHCTRLAGGKAALWWLXRHP 751
SRIHCTRLAG KA WWL +HP
Sbjct: 322 SRIHCTRLAGDKAMNWWLRQHP 343
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 85 WQLVKELKEALNLPAAASFKHVSP 156
WQLVKEL +A +PAAASFKHVSP
Sbjct: 117 WQLVKELSDATKMPAAASFKHVSP 140
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 248 bits (606), Expect = 6e-66
Identities = 124/202 (61%), Positives = 144/202 (71%), Gaps = 5/202 (2%)
Frame = +2
Query: 161 GAAVGLPLTDEEAAVCMVAG-----ELSXXXXXXXXXXXXXXMSSFGDFVALSDPCDVST 325
GAAVGLPL + EAA CMV+ + MSSFGDF+ALS+ CD T
Sbjct: 272 GAAVGLPLNETEAACCMVSDLPIDTKKPSLAAAYARARGADRMSSFGDFIALSEKCDELT 331
Query: 326 ATIISREVSDGVIAPGYSPEALKLLSKKKGGNYCVLKIDPTYEPNLMEQKTIFGLTLEQK 505
A II+REVSDGV+AP + P AL LL+KKK GNYCVLKI+P Y P+ E++T+FGL L QK
Sbjct: 332 AKIINREVSDGVVAPDFDPAALSLLAKKKNGNYCVLKINPNYLPSETEERTVFGLRLRQK 391
Query: 506 RNDAKITAELFKNVVTTKKDLPSNAVRDLIVATIALKYTQSNSVCFARDGQVIGIGAGQQ 685
RN+A I AE F NVV + +L A+ DLIVATIALKY QSNSVCFA GQVIG+GAGQQ
Sbjct: 392 RNNAVINAETFNNVVGSANELNKQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQ 451
Query: 686 SRIHCTRLAGGKAALWWLXRHP 751
SRIHCTRLAG KA WWL +HP
Sbjct: 452 SRIHCTRLAGDKAMNWWLRQHP 473
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 85 WQLVKELKEALNLPAAASFKHVSP 156
WQLVKEL +A +PAAASFKHVSP
Sbjct: 247 WQLVKELSDATKMPAAASFKHVSP 270
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +1
Query: 748 PSVLAMXFXQGVTXXVXANAIXXYFNGTVGXDLPLKQWNPFSKANPXPI 894
P+VL++ + + +NAI +G +G ++ + QW + P+
Sbjct: 473 PTVLSLPWKNAIKRSEKSNAIDVLCSGVLGSEIAIDQWQQYFNEPVEPL 521
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 134 bits (323), Expect(3) = 5e-60
Identities = 62/99 (62%), Positives = 77/99 (77%)
Frame = +2
Query: 272 MSSFGDFVALSDPCDVSTATIISREVSDGVIAPGYSPEALKLLSKKKGGNYCVLKIDPTY 451
MSSFGDF+ALS+ CD TA II+REVSDGV+AP + P AL LL+KKK GNYCVLKI+P Y
Sbjct: 106 MSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALSLLAKKKNGNYCVLKINPNY 165
Query: 452 EPNLMEQKTIFGLTLEQKRNDAKITAELFKNVVTTKKDL 568
P+ E++T+FGL L QKRN+A I AE F NVV + ++
Sbjct: 166 LPSETEERTVFGLRLRQKRNNAVINAETFNNVVGSANEV 204
Score = 104 bits (249), Expect(3) = 5e-60
Identities = 48/62 (77%), Positives = 51/62 (82%)
Frame = +2
Query: 566 LPSNAVRDLIVATIALKYTQSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALWWLXR 745
L A+ DLIVATIALKY QSNSVCFA GQVIG+GAGQQSRIHCTRLAG KA WWL +
Sbjct: 238 LNKQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAMNWWLRQ 297
Query: 746 HP 751
HP
Sbjct: 298 HP 299
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 85 WQLVKELKEALNLPAAASFKHVSP 156
WQLVKEL +A +PAAASFKHVSP
Sbjct: 22 WQLVKELSDATKMPAAASFKHVSP 45
Score = 32.7 bits (71), Expect(3) = 5e-60
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 161 GAAVGLPLTDEEAAVCMVA 217
GAAVGLPL + EAA CMV+
Sbjct: 47 GAAVGLPLNETEAACCMVS 65
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +1
Query: 748 PSVLAMXFXQGVTXXVXANAIXXYFNGTVGXDLPLKQWNPFSKANPXPI 894
P+VL++ + + +NAI +G +G ++ + QW + P+
Sbjct: 299 PTVLSLPWKNAIKRSEKSNAIDVLCSGVLGSEIAIDQWQQYFNEPVEPL 347
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +1
Query: 400 QQEKGRELLCFKD*SHLRTESHGAKDHLRFNIGAKT*RREDHR*TFQKRCDHQKGFAIER 579
QQE G+ KD + + K H+R + G + + E F + QK +
Sbjct: 500 QQENGKTRYACKDCNKTFGQLSNLKVHVRTHTGERPFKCEICTKEFTQLAHLQKHHLVHT 559
Query: 580 REGPHRGDDCSK 615
E PHR D C K
Sbjct: 560 GERPHRCDICDK 571
>AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical
protein F43E2.7a protein.
Length = 272
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 479 IFGLTLEQKRNDAKIT-AELFKNVVTTKKDLPSNAVRDLIVATIALKYTQSNSVCFARD- 652
I G L Q + + ++T AE F+ V+ N RD ++ +A+ + +VCFAR
Sbjct: 50 IGGPLLNQDKEEDELTDAESFRRVIR-------NGFRDSVIRVVAVTAARPFAVCFARQV 102
Query: 653 GQVIG 667
QVIG
Sbjct: 103 AQVIG 107
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 652 ITGEADRVTLSVF*SNRRHDEVPHGVRWQILFGGHNVFEKFSGDLRVVT 506
ITG++D+ + + S HD G+ + IL G N + F +R VT
Sbjct: 40 ITGKSDKEVIDIMISKEEHDVKSIGLMYHILTSGENP-DLFGKMIRYVT 87
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 626 SNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALWWLXRHPA 754
S+ V + D Q + +G GQ S++H +L+G + HPA
Sbjct: 451 SSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPA 492
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 626 SNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALWWLXRHPA 754
S+ V + D Q + +G GQ S++H +L+G + HPA
Sbjct: 451 SSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPA 492
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 626 SNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALWWLXRHPA 754
S+ V + D Q + +G GQ S++H +L+G + HPA
Sbjct: 451 SSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPA 492
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1724 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1757
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 2063 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 2096
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1383 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1416
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1721 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1754
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1724 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1757
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 2063 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 2096
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1721 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1754
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1724 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1757
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 2063 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 2096
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1383 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1416
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1721 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1754
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 623 QSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALW 733
Q CFARD +V+G+G Q S + G A+W
Sbjct: 1723 QVKDYCFARDDRVVGVGVLQLSSVVD---QAGSCAMW 1756
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,565,534
Number of Sequences: 27780
Number of extensions: 300407
Number of successful extensions: 768
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -