Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_C19
(952 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.056
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.056
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.056
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.074
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.40
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.40
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.69
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.69
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.69
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.69
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.2
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.8
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 3.7
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 29 3.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 3.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 3.7
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.9
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 6.5
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 29 6.5
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 29 6.5
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 29 6.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.5
AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical ... 29 6.5
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXG---PXXPXGXPGTL 433
P G P P G P T GPP P G P G P P PG
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 432 XPLYPXPXPPPXRSP 388
P P PP +P
Sbjct: 781 KGGPPPPPPPGMFAP 795
Score = 35.1 bits (77), Expect = 0.074
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXG-PXXPXGXPGTLXP 427
P G P P G P T GPP P G P G P G P P
Sbjct: 708 PITGGPPPPP---GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 426 LYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
P PPP P GP P P P G
Sbjct: 765 --PGGCPPPPPPPPPGGFKGGPPP--PPPPG 791
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 838 PXPPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGG 945
P PPP G P GP P P G P PGG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 845 PPPXXPPXGXXXPALRPXPXGFPXGGXPRXXXG 943
PPP PP G P P P GF G P G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 830 PFXXXPPPXXPPXGXXXPALRPXPXGFPXGGXP 928
P PPP PP G P P P G GG P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 844 PPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGG 945
PPP P GG P P P G G P P G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 838 PXPPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGGGP 951
P PPP G P GP P P G P P P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 830 PFXXXPPPXXPPXGXXXPALRPXPXGFPXGGXP 928
P PPP PP G + P P P GG P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXG---PXXPXGXPGTL 433
P G P P G P T GPP P G P G P P PG
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 432 XPLYPXPXPPPXRSP 388
P P PP +P
Sbjct: 781 KGGPPPPPPPGMFAP 795
Score = 35.1 bits (77), Expect = 0.074
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXG-PXXPXGXPGTLXP 427
P G P P G P T GPP P G P G P G P P
Sbjct: 708 PITGGPPPPP---GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 426 LYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
P PPP P GP P P P G
Sbjct: 765 --PGGCPPPPPPPPPGGFKGGPPP--PPPPG 791
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 838 PXPPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGG 945
P PPP G P GP P P G P PGG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 845 PPPXXPPXGXXXPALRPXPXGFPXGGXPRXXXG 943
PPP PP G P P P GF G P G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 830 PFXXXPPPXXPPXGXXXPALRPXPXGFPXGGXP 928
P PPP PP G P P P G GG P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 844 PPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGG 945
PPP P GG P P P G G P P G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 838 PXPPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGGGP 951
P PPP G P GP P P G P P P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 830 PFXXXPPPXXPPXGXXXPALRPXPXGFPXGGXP 928
P PPP PP G + P P P GG P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXG---PXXPXGXPGTL 433
P G P P G P T GPP P G P G P P PG
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 432 XPLYPXPXPPPXRSP 388
P P PP +P
Sbjct: 364 KGGPPPPPPPGMFAP 378
Score = 35.1 bits (77), Expect = 0.074
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXG-PXXPXGXPGTLXP 427
P G P P G P T GPP P G P G P G P P
Sbjct: 291 PITGGPPPPP---GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 426 LYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
P PPP P GP P P P G
Sbjct: 348 --PGGCPPPPPPPPPGGFKGGPPP--PPPPG 374
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 838 PXPPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGG 945
P PPP G P GP P P G P PGG
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 845 PPPXXPPXGXXXPALRPXPXGFPXGGXPRXXXG 943
PPP PP G P P P GF G P G
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 830 PFXXXPPPXXPPXGXXXPALRPXPXGFPXGGXP 928
P PPP PP G P P P G GG P
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 844 PPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGG 945
PPP P GG P P P G G P P G
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 838 PXPPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGGGP 951
P PPP G P GP P P G P P P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 830 PFXXXPPPXXPPXGXXXPALRPXPXGFPXGGXP 928
P PPP PP G + P P P GG P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.074
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 478 PQXXPPXPXXXPRDPXPPLPXXXXPPXXQPXXGTXTPXAXAP 353
PQ PP P P P PP P PP P A AP
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAP 94
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 950 GPPPGXPGXXPXXE---NPXGXA*GRGPXPPXGXPXGG 846
GPPPG PG P NP G + GP P G P G
Sbjct: 100 GPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFG 137
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 950 GPPPGXPGXXPXXE---NPXGXA*GRGPXPPXGXPXGG 846
GPPPG PG P NP G + GP P G P G
Sbjct: 380 GPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFG 417
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 478 PQXXPPXPXXXPRDPXPPLPXXXXPPXXQPXXGTXTPXAXAPXP 347
P PP P PR P PP PP P T P P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 478 PQXXPPXPXXXPRDPXPPLPXXXXPPXXQPXXGTXTPXAXAPXP 347
P PP P PR P PP PP P T P P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 947 PPPGXPGXXPXXENPXGXA*GRGPXPPXG 861
PPPG PG P G G GP PP G
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 844 PPPXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGGGP 951
PPP G P G GP P P + G PGG P
Sbjct: 435 PPPPGGP-GAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 947 PPPGXPGXXPXXENPXGXA*GRGPXPPXGXPXGG 846
PPPG PG P P G GP PP G P G
Sbjct: 708 PPPGIPGYPPAPPPP-----GVGPPPPQGIPPMG 736
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/85 (25%), Positives = 25/85 (29%)
Frame = -2
Query: 588 PXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXPLYPXPX 409
P P GPP P + G PK GP G PG P+ P
Sbjct: 126 PCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPK-GPDAAPGEPGPKGPIGPPGP 184
Query: 408 PPPXRSPKXXHXXRGPXPRXPXPXG 334
P +P P P P G
Sbjct: 185 PGQAGAPGEPGSPAKSEPAVPGPPG 209
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -2
Query: 588 PXSPXXXXGXPXXTXGP--PQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXPLYPX 415
P P G P P P P G P P P G PG P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC-PGGPPGPAGPAGPP 164
Query: 414 PXPPPXRSPKXXHXXRGPXPRXP 346
P P +P GP P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGP 187
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -2
Query: 588 PXSPXXXXGXPXXTXGP--PQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXPLYPX 415
P P G P P P P G P P P G PG P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC-PGGPPGPAGPAGPP 164
Query: 414 PXPPPXRSPKXXHXXRGPXPRXP 346
P P +P GP P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGP 187
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -2
Query: 588 PXSPXXXXGXPXXTXGP--PQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXPLYPX 415
P P G P P P P G P P P G PG P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC-PGGPPGPAGPAGPP 164
Query: 414 PXPPPXRSPKXXHXXRGPXPRXP 346
P P +P GP P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGP 187
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = -2
Query: 588 PXSPXXXXGXPXXTXGP--PQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXPLYPX 415
P P G P P P P G P P P G PG P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPC-PGGPPGPAGPAGPP 164
Query: 414 PXPPPXRSPKXXHXXRGPXPRXP 346
P P +P GP P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGP 187
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 838 PXPP-PXGXPXGGXGPRP*AXPXGFSXXGXXPGXPG 942
P PP P G P GG GP P A P G PG G
Sbjct: 180 PGPPGPDGAPGGGSGPGP-AGPAGPPGPDGNPGSAG 214
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 838 PXPP-PXGXPXGGXGPRP*AXPXGFSXXGXXPGXPG 942
P PP P G P GG GP P A P G PG G
Sbjct: 180 PGPPGPDGAPGGGSGPGP-AGPAGPPGPDGNPGSAG 214
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 707 GGGXPGGXPXGGETXGKGXRNRGAGPQXAXPQTGXR 600
GG GG P GG G+G R R Q +TG R
Sbjct: 157 GGFTLGGGPSGGRGGGRGGRGRQFDRQSGSDRTGVR 192
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 1/91 (1%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXG-PPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXP 427
P GSP P P G PP P RG P+ G P G+ P
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---PTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 426 LYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
P RSP G P P G
Sbjct: 332 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 362
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXP--GTLX 430
PA GSP P P T PP P G P P P G P G+L
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSPPPPRAGSPPP---PPPPRGSPPTGSLP 313
Query: 429 PLYPXPXPPP--XRSPKXXHXXRGPXPRXPXPXG 334
P PPP SP + P P G
Sbjct: 314 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 347
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 1/91 (1%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXG-PPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXP 427
P GSP P P G PP P RG P+ G P G+ P
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---PTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 426 LYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
P RSP G P P G
Sbjct: 353 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 383
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXP--GTLX 430
PA GSP P P T PP P G P P P G P G+L
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSPPPPRAGSPPP---PPPPRGSPPTGSLP 334
Query: 429 PLYPXPXPPP--XRSPKXXHXXRGPXPRXPXPXG 334
P PPP SP + P P G
Sbjct: 335 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 368
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 1/91 (1%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXG-PPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXP 427
P GSP P P G PP P RG P+ G P G+ P
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---PTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 426 LYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
P RSP G P P G
Sbjct: 338 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 368
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXP--GTLX 430
PA GSP P P T PP P G P P P G P G+L
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSPPPPRAGSPPP---PPPPRGSPPTGSLP 319
Query: 429 PLYPXPXPPP--XRSPKXXHXXRGPXPRXPXPXG 334
P PPP SP + P P G
Sbjct: 320 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 353
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 850 PXGXPXGGXGPRP*AXPXGFSXXGXXPGXPGGGP 951
P P G GP P F+ PG PGG P
Sbjct: 295 PGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYP 328
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 468 GPXXPXGXPGTLXPLYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
GP P G G PL P P PP P +GP P P G
Sbjct: 144 GPAGPPGPQGNKGPLGP-PGPPGPEGPNGTAGNKGP-AGPPGPGG 186
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -3
Query: 944 PPGXPGXXPXXENPXGXA*GRGPXPPXGXPXGGGXGXXG 828
P G PG P E P G A +GP P G GG G G
Sbjct: 157 PLGPPGP-PGPEGPNGTAGNKGPAGPPG--PGGKPGPAG 192
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 468 GPXXPXGXPGTLXPLYPXPXPPPXRSPKXXHXXRGPXPRXPXPXG 334
GP P G G PL P P PP P +GP P P G
Sbjct: 146 GPAGPPGPDGNKGPLGP-PGPPGPEGPNGEPGNKGP-AGPPGPGG 188
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -1
Query: 466 PPXPXXXPRDPXPPLPXXXXPPXXQPXXGTXTPXAXAPXP 347
PP P P D P+P PP T P P P
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = -3
Query: 944 PPGXPGXX-PXXE----NPXGXA*GRGPXPPXGXPXGGGXGXXG 828
PPG PG P E P G +GP P G P G G G G
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDG 189
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = -3
Query: 944 PPGXPGXX-PXXE----NPXGXA*GRGPXPPXGXPXGGGXGXXG 828
PPG PG P E P G +GP P G P G G G G
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDG 189
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 426 LYPXPXPPPXRSPKXXHXXRGPXPRXPXP 340
+ P P P P R P R P PR P P
Sbjct: 534 ILPSPEPSPVREPTPPPPPREPTPREPTP 562
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 941 PGXPGXXPXXENPXGXA*GRGPXPPXGXPXGGGXG 837
PG PG NP G GP P G P G G
Sbjct: 124 PGNPGGLGGPGNPGGPGTPGGPGTPGGQPHGTAGG 158
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 947 PPPGXPGXXPXXENPXGXA*GRGPXPPXGXPXG 849
PPP G P NP G G GP PP P G
Sbjct: 28 PPPQCCGPPPACGNPCGG--GFGPPPPPFGPVG 58
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 947 PPPGXPGXXPXXENPXGXA*GRGPXPPXGXP 855
PPPG PG P P G GP P G P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGP-PMPGPP 205
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 947 PPPGXPGXXPXXENPXGXA*GRGPXPPXGXP 855
PPPG PG P P G GP P G P
Sbjct: 176 PPPGMPGAYPPPRMPIGHGPPGGP-PMPGPP 205
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 950 GPPPGXPGXXPXXENPXGXA*GRGPXPPXGXPXGGGXGXXG 828
G PPG G P G A GP G P GG G G
Sbjct: 92 GMPPGRGGYMPPYRGGYGVAPNGGPG-AYGGPYNGGPGAYG 131
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 950 GPPPGXPGXXPXXENPXGXA*GRGPXPPXGXPXGGGXGXXG 828
G PPG G P G A GP G P GG G G
Sbjct: 101 GMPPGRGGYMPPYRGGYGVAPNGGPG-AYGGPYNGGPGAYG 140
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 950 GPPPGXPGXXPXXENPXGXA*GRGPXPPXGXPXGGGXGXXG 828
G PPG G P G A GP G P GG G G
Sbjct: 92 GMPPGRGGYMPPYRGGYGVAPNGGPG-AYGGPYNGGPGAYG 131
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.5
Identities = 27/89 (30%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Frame = -2
Query: 603 PARGSPXSPXXXXGXPXXTXGPPQNPXRRGXXRXXXXXXXXXPKXGPXXPXGXPGTLXPL 424
P G P P G P + GPP G P GP P G P + P
Sbjct: 476 PPSGGPPGPFDPSGAPP-SGGPP------GPFNPSGAPPSGGPP-GPFDPSGAPPSGMPP 527
Query: 423 YPXP--XPPPXRSPKXXHXXRG-PXPRXP 346
P P P P SP G P P P
Sbjct: 528 VPLPTDLPIPSESPSFFQWIFGRPKPSGP 556
>AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical
protein F49F1.9 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 429 PLYPXPXPPPXRSPKXXHXXRGPXPRXPXPXGH 331
P P P P P + + H GP R P P G+
Sbjct: 58 PRPPRPTPKPVENMETLHGPFGPGVRYPIPGGY 90
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 420 PXPXPPPXRSPKXXHXXRGPXPRXPXPXGHKRA 322
P P PPP PK P P P P ++A
Sbjct: 178 PPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKA 210
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 844 PPPXGXPXGGXGPRP*AXPXGFSXXGXX--PGXPGG 945
P P G P G GP P P G PG PGG
Sbjct: 185 PGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGG 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,420,959
Number of Sequences: 27780
Number of extensions: 219118
Number of successful extensions: 1944
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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