Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_C17
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 202 3e-52
AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical ... 83 4e-16
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 36 0.031
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 36 0.041
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 33 0.29
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 32 0.67
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 31 1.2
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 31 1.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 31 1.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 31 1.2
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 30 2.0
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 30 2.7
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 29 3.6
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 29 3.6
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 29 3.6
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 29 4.7
Z69717-2|CAA93532.2| 204|Caenorhabditis elegans Hypothetical pr... 29 4.7
U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated k... 29 4.7
U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated k... 29 4.7
U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated k... 29 4.7
AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated... 29 4.7
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 6.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 6.2
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 29 6.2
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 28 8.2
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 28 8.2
L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore co... 28 8.2
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 28 8.2
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 28 8.2
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 202 bits (493), Expect = 3e-52
Identities = 84/139 (60%), Positives = 100/139 (71%)
Frame = +1
Query: 220 MGLCKCPKRRVTNQFCFEHRVNVCENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTKPL 399
MGLCKCPKR+VTN FC+EHRVNVCE C+V NHP C++QSYL WL D DY+P C +C L
Sbjct: 1 MGLCKCPKRKVTNLFCYEHRVNVCEFCLVDNHPNCVVQSYLTWLTDQDYDPNCSLCKTTL 60
Query: 400 NEGECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSCATLVFPPPNLVSPVADVLKE 579
EG+ IRL C H+ HW C + P TTAPAGY+CP C+ VFPP N VSP+ + L+E
Sbjct: 61 AEGDTIRLNCLHLLHWKCFDEWAANFPATTAPAGYRCPCCSQEVFPPINEVSPLIEKLRE 120
Query: 580 KLAGVNWARAGLGLPLLSE 636
+L NWARA LGLP L E
Sbjct: 121 QLKQSNWARAALGLPTLPE 139
>AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical
protein Y45G12B.2b protein.
Length = 246
Score = 82.6 bits (195), Expect = 4e-16
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +1
Query: 436 VFHWSCAESKYRALPRTTAPAGYQCPSCATLVFPPPNLVSPVADVLKEKLAGVNWARAGL 615
+ HW C + P TTAPAGY+CP C+ VFPP N VSP+ + L+E+L NWARA L
Sbjct: 10 LLHWKCFDEWAANFPATTAPAGYRCPCCSQEVFPPINEVSPLIEKLREQLKQSNWARAAL 69
Query: 616 GLPLLSE 636
GLP L E
Sbjct: 70 GLPTLPE 76
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 36.3 bits (80), Expect = 0.031
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 361 DYNPICEIC-TKPLNEGECIRLTCYHVFHWSCA----ESKYRALPRTTAPAGYQCPSC 519
D + +C IC T+ L CIRL C H+FH+ C E ++ PR QCP C
Sbjct: 3512 DGDDVCVICFTERLGAAPCIRLGCGHMFHFHCVRMILERRWNG-PRIVF-RFMQCPLC 3567
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.041
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 CEICTKPLNEGECIRLTCYHVFHWSC-AESKYRALPRTTAPAGYQCPSCA 522
C C KP + + + +C H + W C A + + + ++ A + CPSCA
Sbjct: 18 CVKCKKPRGDLQYLGSSCKHAYCWECIATFQQKPSGKRSSVARHMCPSCA 67
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 376 CEICTKPLNEGECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSCATLVFPP 540
C IC + N L C H+F W+C + A + + + +CP C L F P
Sbjct: 255 CSICLENKNPSA---LFCGHLFCWTCIQEHAVAATSSASTSSARCPQC-RLEFQP 305
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 361 DYNPICEICTKPLNEGECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSC 519
++ C +C P ++ + C H FH C + K+ A P T P QCP C
Sbjct: 78 EFESACNMCKFPGDDCPLVLGICRHAFHRHCID-KWIAAP-TNQPRA-QCPLC 127
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +1
Query: 235 CPKRRVTNQFCFEHRVNVC-ENCMVTNHPKCIIQSYLQWLQDSDYNP-ICEICTKPLNEG 408
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQC------- 353
Query: 409 ECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSCA 522
+C V+ +K+ P G +C CA
Sbjct: 354 QCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECA 391
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 376 CEICTKPLNEGECIR-LTCYHVFHWSCAE 459
C IC + GE +R L C HVFH +C +
Sbjct: 247 CAICLESFASGEKLRHLPCRHVFHCNCID 275
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +1
Query: 235 CPKRRVTNQFCFEHRVNVC-ENCMVTNHPKCIIQSYLQWLQDSDYNP-ICEICTKPLNEG 408
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQC------- 353
Query: 409 ECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSCA 522
+C V+ +K+ P G +C CA
Sbjct: 354 QCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECA 391
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +1
Query: 235 CPKRRVTNQFCFEHRVNVC-ENCMVTNHPKCIIQSYLQWLQDSDYNP-ICEICTKPLNEG 408
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQC------- 353
Query: 409 ECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSCA 522
+C V+ +K+ P G +C CA
Sbjct: 354 QCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECA 391
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 376 CEICTKPLNEGECI-RLTCYHVFHWSC 453
C +C +GE I +L C HVFH C
Sbjct: 433 CTVCLSSFEDGESIQKLRCNHVFHPEC 459
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 832 LLKYFRTYWQVRQAFVLWNVVXQ*QTCYLIHHHLLQ-LVCHDDPGYNKR 689
++ YF YW + AF+L+ + + ++I+H L+ V H + +++
Sbjct: 128 IMSYFPIYWVAKAAFLLYLYLPETHGSHVIYHQLIDPFVAHMEKSMSRK 176
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 349 LQDSDYNPICEICTKPLN--EGECIRLTCYHVFHWS--CAESKYRALPRTTAPAGYQCPS 516
L+++ Y C IC + +G TCYH+FH S C R+ ++CP+
Sbjct: 228 LENNKYE--CAICYTRITTRQGVWSCKTCYHIFHISTGCITDWARSSRDKEGANTWRCPT 285
Query: 517 CAT 525
C T
Sbjct: 286 CQT 288
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 376 CEICTKPLNEGECIRLT-CYHVFHWSCAESKYRALPRTTAPAGYQC 510
CE+C CI+ C HVF C YR + + QC
Sbjct: 186 CEVCYDSQMGQHCIKFQPCSHVFCKQCTFDYYRTISKGVVSKAMQC 231
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Frame = +1
Query: 289 CENCMVTNHPKCIIQSYLQWLQDSDYN------PICEICTKPLNEGECIRL-TCYHVFHW 447
C C + HP+CI Y +C IC KP E E + C FH
Sbjct: 348 CATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSICNKPEKEDEIVFCDRCDRGFHT 407
Query: 448 SCAESKYRALPRTT 489
C K LP+ T
Sbjct: 408 YCVGLK--KLPQGT 419
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 607 AGLGLPLLSEDQDLK-GAASRRSQSPLDTAYYSLDHRGTPVGASDDESNSRSATXTPHSI 783
AG LLSE K +SRR+Q P+ Y + + S+S S P
Sbjct: 445 AGSTTSLLSERAPKKRSTSSRRNQEPITITYIGRPRTPSEGDVASTVSSSTSRNRRPSPS 504
Query: 784 VQMPDEPANMYENTS 828
V P ++Y TS
Sbjct: 505 VAKKTSPPSIYAITS 519
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 289 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 393
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 196 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 228
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 289 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 393
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 2049 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 2081
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 289 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 393
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 475 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 507
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 289 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 393
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 293 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 325
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 289 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 393
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 188 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 220
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 376 CEIC-TKPLNEGECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSC 519
C C T+P +CI L CYH+F +C ++ Y R +CP C
Sbjct: 782 CPSCKTRPK---DCIMLKCYHLFCETCIKTMYDTRQR-------KCPKC 820
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 376 CEIC-TKPLNEGECIRLTCYHVFHWSCAESKYRALPRTTAPAGYQCPSC 519
C C T+P +CI L CYH+F +C ++ Y R +CP C
Sbjct: 785 CPSCKTRPK---DCIMLKCYHLFCETCIKTMYDTRQR-------KCPKC 823
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 628 LSEDQDLKGAASRRSQSPLDTAYYSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPA 807
++E Q A +RRS + + + HR + VG S S ++ + ++M D PA
Sbjct: 620 IAELQSSPAAKNRRSLADMTPGKDKMKHRVSSVGTSGRRSRAKKEEEHHENDIEMEDAPA 679
>Z69717-2|CAA93532.2| 204|Caenorhabditis elegans Hypothetical
protein E01G6.2 protein.
Length = 204
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 661 SRRSQSPLDTAYYSLDHRGTPVGASDDESNSRSAT 765
S R++SP T+ YSLD R + GAS S S T
Sbjct: 157 SVRAKSPEPTSSYSLDGRDSGRGASSPSSTMSSTT 191
>U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform c protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 682 LDTAYYSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANM 813
+D Y LD + +D+ES S SA+ + H+ + MP +PA +
Sbjct: 460 VDQRSYLLDFKSL----ADEESGSASASSSRHASMSMPQKPAGI 499
>U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform a protein.
Length = 624
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 682 LDTAYYSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANM 813
+D Y LD + +D+ES S SA+ + H+ + MP +PA +
Sbjct: 522 VDQRSYLLDFKSL----ADEESGSASASSSRHASMSMPQKPAGI 561
>U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform b protein.
Length = 626
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 682 LDTAYYSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANM 813
+D Y LD + +D+ES S SA+ + H+ + MP +PA +
Sbjct: 524 VDQRSYLLDFKSL----ADEESGSASASSSRHASMSMPQKPAGI 563
>AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated
protein kinase alphasubunit 1 protein.
Length = 624
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 682 LDTAYYSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANM 813
+D Y LD + +D+ES S SA+ + H+ + MP +PA +
Sbjct: 522 VDQRSYLLDFKSL----ADEESGSASASSSRHASMSMPQKPAGI 561
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 697 YSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANMY 816
+ LDH + ES SR + P + +P++PAN +
Sbjct: 134 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPF 173
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 697 YSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANMY 816
+ LDH + ES SR + P + +P++PAN +
Sbjct: 673 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPF 712
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 697 YSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANMY 816
+ LDH + ES SR + P + +P++PAN +
Sbjct: 134 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPF 173
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 697 YSLDHRGTPVGASDDESNSRSATXTPHSIVQMPDEPANMY 816
+ LDH + ES SR + P + +P++PAN +
Sbjct: 673 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPF 712
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 376 CEICTKPLNEGECIRLT-CYHVFHWSCAE 459
C +C P + IRL C H++H SC +
Sbjct: 227 CAVCLDPYQLQDVIRLLPCKHIYHKSCID 255
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 199 IPKNKTKMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 333
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 199 IPKNKTKMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 333
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
>L23651-5|AAU87829.1| 1127|Caenorhabditis elegans Nuclear pore
complex protein protein15 protein.
Length = 1127
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 313 HPKCIIQSYLQ-WLQDSDYNPICEICTKPLNEGECIRLTCYHVFHWSCAESKYRALPRTT 489
+P + +++L W + + + C LN+ C L+ +F W A+S +RA+ T
Sbjct: 18 YPALVKEAFLNNWHASAHRSEVTSNCAS-LNDRYCWVLSRNQIFIWERAKSSHRAIIPTQ 76
Query: 490 AP 495
P
Sbjct: 77 LP 78
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 199 IPKNKTKMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 333
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 199 IPKNKTKMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 333
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,609,986
Number of Sequences: 27780
Number of extensions: 465013
Number of successful extensions: 1114
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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