Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_C16
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    32   0.64 
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    29   6.0  
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    29   6.0  
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    28   7.9  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 604 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 726
           Y+  R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
           protein K08E5.3a protein.
          Length = 3767

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 859 VGXTGWTQDDSYRIRRSGRAEPGGSCTQ 776
           +G T   QDD   + R G  +PG +CTQ
Sbjct: 491 IGYTCRCQDDYVDVSREGARKPGRNCTQ 518


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
           protein K08E5.3a protein.
          Length = 3767

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 859 VGXTGWTQDDSYRIRRSGRAEPGGSCTQ 776
           +G T   QDD   + R G  +PG +CTQ
Sbjct: 491 IGYTCRCQDDYVDVSREGARKPGRNCTQ 518


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
           cell adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 859 VGXTGWTQDDSYRIRRSGRAEPGGSCTQ 776
           +G T   QDD   + R G  +PG +CTQ
Sbjct: 491 IGYTCRCQDDYVDVSREGARKPGRNCTQ 518


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = -2

Query: 780 HSPAWSERXTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQGETPGIF 607
           H  AW+ R  P    ++ +  K  ++ K E + G     G+E+       +G+T   F
Sbjct: 96  HDKAWNNRSLPQKSRWNQASVKLAQYQKAEEKMGFIKVFGTEEFQNYSKRRGQTRNSF 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,163,299
Number of Sequences: 27780
Number of extensions: 404666
Number of successful extensions: 1066
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)