Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_C15
(1014 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 37 0.026
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.25
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.25
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.75
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.75
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.75
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.7
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 26 3.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 7.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 7.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 7.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 23 7.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 23 7.5
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 36.7 bits (81), Expect = 0.026
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPPXXXKKTP 506
PPPPPP K PPPP KTP
Sbjct: 86 PPPPPPPPTLKAPPPPPILGLKTP 109
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 579 PPPPPPXXXXKKXXPPPXFXKKKPP 505
PPPPPP K PPP K P
Sbjct: 85 PPPPPPPPPTLKAPPPPPILGLKTP 109
Score = 26.6 bits (56), Expect(2) = 4.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 579 PPPPPPXXXXKKXXPPP 529
PPPPPP + PPP
Sbjct: 70 PPPPPPLISILQQAPPP 86
Score = 21.0 bits (42), Expect(2) = 4.5
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -1
Query: 411 PXPPPXKXXXXPPXXGGEXPPGKN 340
P PPP PP G P K+
Sbjct: 89 PPPPPTLKAPPPPPILGLKTPSKS 112
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/76 (27%), Positives = 22/76 (28%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPPXXXKKTPXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXGPXPPP 398
P PPPP PP P TP P PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 397 XXKXXGPPXXGGGXPP 350
+ GPP GG PP
Sbjct: 322 PSR-FGPPGMGGMPPP 336
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/76 (27%), Positives = 22/76 (28%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPPXXXKKTPXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXGPXPPP 398
P PPPP PP P TP P PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 397 XXKXXGPPXXGGGXPP 350
+ GPP GG PP
Sbjct: 332 PSR-FGPPGMGGMPPP 346
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.75
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP K PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.75
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP K PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPP 775
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPP 776
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.75
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP K PPPP
Sbjct: 354 PPPPPPPGGFKGGPPPP 370
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 342 PPPPPPPGGCPPPPPPP 358
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 343 PPPPPPGGCPPPPPPPP 359
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 341 PPPPPPPPGGCPPPPPP 357
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPPXXXKKTP 506
PPPPPP PPPP +P
Sbjct: 63 PPPPPPPPPPMCPPPPPPMPSYSP 86
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP + PPPP
Sbjct: 479 PPPPPPENEPEEFPPPP 495
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 538 PPPPPPVGMANGGPPPP 554
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 26.2 bits (55), Expect(2) = 3.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 574 PPPPPXXXXKXXPPPP 527
PPPPP PPPP
Sbjct: 84 PPPPPMFAGGIPPPPP 99
Score = 21.8 bits (44), Expect(2) = 3.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -3
Query: 412 PXPPPXXKXXGPPXXGGGXPP 350
P PPP PP G PP
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPP 115
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPP 1359
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 579 PPPPPPMLGGPPPPPPP 595
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 576 PPPPPPPPPMLGGPPPP 592
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 577 PPPPPPPPMLGGPPPPP 593
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 578 PPPPPPPMLGGPPPPPP 594
Score = 25.8 bits (54), Expect(2) = 7.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPP PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPP 579
Score = 21.0 bits (42), Expect(2) = 7.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 412 PXPPPXXKXXGPP 374
P PPP GPP
Sbjct: 578 PPPPPPPMLGGPP 590
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 41 PPPPPPCGGGYEAPPPP 57
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 577 PPPPPPXXXXKXXPPPP 527
PPPPPP PPPP
Sbjct: 252 PPPPPPCPMPIPCPPPP 268
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = -3
Query: 604 KKXKXXXXXPPPPPPXXXXKXXP---PPPXXXKKTP 506
+K + PPPPPP + P PPP TP
Sbjct: 129 RKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTP 164
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -3
Query: 577 PPPPPPXXXX--KXXPPPPXXXKKTP 506
PPPPPP K PPPP ++ P
Sbjct: 158 PPPPPPVSVPSSKPTPPPPPPAQQKP 183
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -3
Query: 577 PPPPPPXXXX--KXXPPPPXXXKKTP 506
PPPPPP K PPPP ++ P
Sbjct: 158 PPPPPPVSVPSSKPTPPPPPPAQQKP 183
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Frame = -3
Query: 577 PPPPPPXXXXKXXP-PPPXXXKKT 509
PPPP P P PPP K T
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPT 321
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 412 PXPPPXXKXXGPPXXGGGXPPR 347
P PPP PP PPR
Sbjct: 313 PPPPPPKPTIRPPPIPASPPPR 334
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Frame = -3
Query: 577 PPPPPPXXXXKXXP-PPPXXXKKT 509
PPPP P P PPP K T
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPT 99
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 412 PXPPPXXKXXGPPXXGGGXPPR 347
P PPP PP PPR
Sbjct: 91 PPPPPPKPTIRPPPIPASPPPR 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,817,492
Number of Sequences: 27780
Number of extensions: 161319
Number of successful extensions: 4044
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2667870690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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