Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_C12
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093008-1|AAH93008.1|  206|Homo sapiens hypothetical protein MG...    51   7e-06
BC005064-1|AAH05064.1|  181|Homo sapiens FKSG24 protein protein.       51   7e-06
AF416712-1|AAL16806.1|  181|Homo sapiens unknown protein.              50   9e-06
BC073997-1|AAH73997.1|  195|Homo sapiens peroxisomal membrane pr...    32   3.2  
AY044439-1|AAK95858.1|  195|Homo sapiens 22 kDa peroxisomal memb...    32   3.2  
AF250136-1|AAF73963.1|  195|Homo sapiens 22kDa peroxisomal membr...    32   3.2  

>BC093008-1|AAH93008.1|  206|Homo sapiens hypothetical protein
           MGC12972 protein.
          Length = 206

 Score = 50.8 bits (116), Expect = 7e-06
 Identities = 26/76 (34%), Positives = 44/76 (57%)
 Frame = +2

Query: 527 LTGGLHFLFKKNLLLTNSITSGGFMAIGDLFQQEFEFQSKLLKERYDWARAVRMFIVGTV 706
           L+ G      + LL+TN++  G  MA GD  +Q +E +++   + +D  R+  MF VG  
Sbjct: 13  LSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIRARP-GQVFDPRRSASMFAVGCS 71

Query: 707 LGPMHHYYYIYLDXVY 754
           +GP  HY+Y+ LD ++
Sbjct: 72  MGPFLHYWYLSLDRLF 87


>BC005064-1|AAH05064.1|  181|Homo sapiens FKSG24 protein protein.
          Length = 181

 Score = 50.8 bits (116), Expect = 7e-06
 Identities = 26/76 (34%), Positives = 44/76 (57%)
 Frame = +2

Query: 527 LTGGLHFLFKKNLLLTNSITSGGFMAIGDLFQQEFEFQSKLLKERYDWARAVRMFIVGTV 706
           L+ G      + LL+TN++  G  MA GD  +Q +E +++   + +D  R+  MF VG  
Sbjct: 13  LSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIRARP-GQVFDPRRSASMFAVGCS 71

Query: 707 LGPMHHYYYIYLDXVY 754
           +GP  HY+Y+ LD ++
Sbjct: 72  MGPFLHYWYLSLDRLF 87


>AF416712-1|AAL16806.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 50.4 bits (115), Expect = 9e-06
 Identities = 26/76 (34%), Positives = 44/76 (57%)
 Frame = +2

Query: 527 LTGGLHFLFKKNLLLTNSITSGGFMAIGDLFQQEFEFQSKLLKERYDWARAVRMFIVGTV 706
           L+ G      + LL+TN++  G  MA GD  +Q +E +++   + +D  R+  MF VG  
Sbjct: 13  LSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIRARP-GQVFDPRRSASMFAVGCS 71

Query: 707 LGPMHHYYYIYLDXVY 754
           +GP  HY+Y+ LD ++
Sbjct: 72  VGPFLHYWYLSLDRLF 87


>BC073997-1|AAH73997.1|  195|Homo sapiens peroxisomal membrane
           protein 2, 22kDa protein.
          Length = 195

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +2

Query: 566 LLTNSITSGGFMAIGDLFQQEFEFQSKLLKER-YDWARAVRMFIVGTVL-GPMHHYYYIY 739
           +LT + TSG   A+G+   Q  E + K    R  D    +R  + G    GP+ H++Y +
Sbjct: 34  VLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFF 93

Query: 740 LD 745
           ++
Sbjct: 94  ME 95


>AY044439-1|AAK95858.1|  195|Homo sapiens 22 kDa peroxisomal
           membrane protein 2 protein.
          Length = 195

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +2

Query: 566 LLTNSITSGGFMAIGDLFQQEFEFQSKLLKER-YDWARAVRMFIVGTVL-GPMHHYYYIY 739
           +LT + TSG   A+G+   Q  E + K    R  D    +R  + G    GP+ H++Y +
Sbjct: 34  VLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFF 93

Query: 740 LD 745
           ++
Sbjct: 94  ME 95


>AF250136-1|AAF73963.1|  195|Homo sapiens 22kDa peroxisomal membrane
           protein-like protein.
          Length = 195

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +2

Query: 566 LLTNSITSGGFMAIGDLFQQEFEFQSKLLKER-YDWARAVRMFIVGTVL-GPMHHYYYIY 739
           +LT + TSG   A+G+   Q  E + K    R  D    +R  + G    GP+ H++Y +
Sbjct: 34  VLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFF 93

Query: 740 LD 745
           ++
Sbjct: 94  ME 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,838,556
Number of Sequences: 237096
Number of extensions: 1841028
Number of successful extensions: 2766
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2761
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)