Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_C08
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 38 0.010
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 35 0.071
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 35 0.071
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 33 0.29
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 33 0.29
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 33 0.29
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 33 0.29
AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical ... 32 0.50
Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41278-2|AAK31509.1| 403|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 29 6.2
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 29 6.2
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 29 6.2
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 28 8.2
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 172 IELKMKPDPKAC--CVICQLVFCCGDCRQRHEKFVHGLTYDCPICR 303
+ELK +PD K C IC VFC RH H +Y C +CR
Sbjct: 40 VELK-RPDLKGSFRCSICSKVFCHSSSLSRHRMQAHFKSYKCTVCR 84
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 175 ELKMKPDPKAC--CVICQLVFCCGDCRQRHEKFVHGLTYDCPIC 300
ELK +PD K C ICQ VFC RH H +Y C C
Sbjct: 6 ELK-RPDLKGSFPCSICQKVFCHSSSLSRHRMQAHFKSYTCTTC 48
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 175 ELKMKPDPKAC--CVICQLVFCCGDCRQRHEKFVHGLTYDCPIC 300
ELK +PD K C ICQ VFC RH H +Y C C
Sbjct: 6 ELK-RPDLKGSFPCSICQKVFCHSSSLSRHRMQAHFKSYTCTTC 48
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -3
Query: 298 RSGSRKSSRARTFRVSGGSRHSRKQVDRSHSKPSGLVSFLIQSPHF 161
RS SR SR RT R R SR++ DRSHS+ S S H+
Sbjct: 44 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW 89
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -3
Query: 298 RSGSRKSSRARTFRVSGGSRHSRKQVDRSHSKPSGLVSFLIQSPHF 161
RS SR SR RT R R SR++ DRSHS+ S S H+
Sbjct: 72 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW 117
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -3
Query: 298 RSGSRKSSRARTFRVSGGSRHSRKQVDRSHSKPSGLVSFLIQSPHF 161
RS SR SR RT R R SR++ DRSHS+ S S H+
Sbjct: 130 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW 175
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -3
Query: 298 RSGSRKSSRARTFRVSGGSRHSRKQVDRSHSKPSGLVSFLIQSPHF 161
RS SR SR RT R R SR++ DRSHS+ S S H+
Sbjct: 131 RSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW 176
>AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical
protein F36F12.8 protein.
Length = 272
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 166 EAIELKMKPDPKA--CCVICQLVFCCGDCRQRHEKFVHGLTYDCPICRGSNYL 318
E ELK +PD + C+ C F G RH K VH Y C +C YL
Sbjct: 27 EESELK-RPDLRGDFLCLSCGQNFKHGASLNRHRKLVHSDEYTCMLCARKLYL 78
>Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical
protein F15G9.5 protein.
Length = 272
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 377 GRCSRKICFMKSSVKVCGLQR*LEPLQIGQS*VKPCTNFS 258
GRCS +C KS VC R +E L + + PC ++
Sbjct: 137 GRCSNSVCHTKSPGSVC--DRKMEKLCVDNTCENPCARYA 174
>Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical
protein K04G2.10 protein.
Length = 319
Score = 29.1 bits (62), Expect = 4.7
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +2
Query: 383 YCKKCNKQFNRMEDLINVEECTSISELIKENEIK 484
YC CN+Q ++++L++ T+I +++N ++
Sbjct: 109 YCPGCNRQIRKVQELMDERYLTNICNEVEKNTMR 142
>U41278-2|AAK31509.1| 403|Caenorhabditis elegans Hypothetical
protein F33G12.3 protein.
Length = 403
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 389 KKCNKQFNRMEDLINVEECTSIS-ELIKENEIKAKEINVDVKFDSLYEKILDEAQTKANR 565
K +F ++E+L +E + EL++ KA E ++ + Y+ I+DE + N
Sbjct: 26 KLTGAKFQKLENLQRMERMLNKEIELLQNATRKALETHLVTCNYAFYKSIIDEVEEMENA 85
Query: 566 TAVI 577
TAV+
Sbjct: 86 TAVL 89
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +3
Query: 621 SESDDDNLPEGIGTPHLE----AAGKTP-RLKRQRVATPHVKKLLSLMRQKVVEEYEETL 785
S+ DD+L G +P ++ + KTP KR +V+ ++ +++ ++ ++
Sbjct: 1130 SDLKDDSLTNG-ASPEVDLLSTSDNKTPTNRKRSQVSESNINN--KIVKFATIQSLLNSI 1186
Query: 786 DDGNVDGSPVTKXTPSRNENETEDQR 863
DD ++DG PS ++ +T R
Sbjct: 1187 DDYSIDGESPEDDLPSTSDKKTPTSR 1212
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +3
Query: 621 SESDDDNLPEGIGTPHLE----AAGKTP-RLKRQRVATPHVKKLLSLMRQKVVEEYEETL 785
S+ DD+L G +P ++ + KTP KR +V+ ++ +++ ++ ++
Sbjct: 1130 SDLKDDSLTNG-ASPEVDLLSTSDNKTPTNRKRSQVSESNINN--KIVKFATIQSLLNSI 1186
Query: 786 DDGNVDGSPVTKXTPSRNENETEDQR 863
DD ++DG PS ++ +T R
Sbjct: 1187 DDYSIDGESPEDDLPSTSDKKTPTSR 1212
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +3
Query: 621 SESDDDNLPEGIGTPHLE----AAGKTP-RLKRQRVATPHVKKLLSLMRQKVVEEYEETL 785
S+ DD+L G +P ++ + KTP KR +V+ ++ +++ ++ ++
Sbjct: 1130 SDLKDDSLTNG-ASPEVDLLSTSDNKTPTNRKRSQVSESNINN--KIVKFATIQSLLNSI 1186
Query: 786 DDGNVDGSPVTKXTPSRNENETEDQR 863
DD ++DG PS ++ +T R
Sbjct: 1187 DDYSIDGESPEDDLPSTSDKKTPTSR 1212
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +3
Query: 621 SESDDDNLPEGIGTPHLE----AAGKTP-RLKRQRVATPHVKKLLSLMRQKVVEEYEETL 785
S+ DD+L G +P ++ + KTP KR +V+ ++ +++ ++ ++
Sbjct: 1130 SDLKDDSLTNG-ASPEVDLLSTSDNKTPTNRKRSQVSESNINN--KIVKFATIQSLLNSI 1186
Query: 786 DDGNVDGSPVTKXTPSRNENETEDQR 863
DD ++DG PS ++ +T R
Sbjct: 1187 DDYSIDGESPEDDLPSTSDKKTPTSR 1212
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -3
Query: 307 SLCRSGSRKSSRARTFRVSGGSRHSRKQVDRSHSKPSG 194
S +S SR SR+ R S S K+VDRS S P G
Sbjct: 249 SKSKSRSRSRSRSADNRKSRSPSRSPKKVDRSPSPPRG 286
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +3
Query: 690 PRLKRQRVATPHVKK------LLSLMRQKVVEE-YEETLDDGNVDGSPVTKXTPSRNENE 848
PR R+R A P + + LS+ + +++EE Y L DG + + +RN N
Sbjct: 1271 PRPDRKRPAGPPIYRPPPKQPKLSISKTRILEEAYANLLKDGKLTAHEIATFFANRNNNT 1330
Query: 849 TEDQR 863
DQ+
Sbjct: 1331 EIDQK 1335
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +3
Query: 690 PRLKRQRVATPHVKK------LLSLMRQKVVEE-YEETLDDGNVDGSPVTKXTPSRNENE 848
PR R+R A P + + LS+ + +++EE Y L DG + + +RN N
Sbjct: 1269 PRPDRKRPAGPPIYRPPPKQPKLSISKTRILEEAYANLLKDGKLTAHEIATFFANRNNNT 1328
Query: 849 TEDQR 863
DQ+
Sbjct: 1329 EIDQK 1333
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 377 PXYCKKCNKQFNRMEDLINVEECTSISELIKENEIKAKEINVDVKFDSLYEKILDEAQTK 556
P CKKC++ +ED + E TS + KEN+++ K ++ K D E + +E + K
Sbjct: 434 PIDCKKCSQTLQTIED-VKKELKTSQN---KENKMRKKVSELEKKLD--VENVQNEQEVK 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,625,480
Number of Sequences: 27780
Number of extensions: 335835
Number of successful extensions: 1076
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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