Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_C01
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.61 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   1.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   1.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   4.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   4.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 217 YIFIFSYGFSDSLFYFGRFFNFYHC 143
           Y++I S G     +Y GR F +Y C
Sbjct: 133 YLWISSVGVRMFQYYIGRSFTYYVC 157


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 603 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVNH 704
           L + N+  +LT    K  W+K L  L ++Q  N+
Sbjct: 75  LYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNN 108


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 603 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVNH 704
           L + N+  +LT    K  W+K L  L ++Q  N+
Sbjct: 75  LYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNN 108



 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 603 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVN 701
           L I N+  ILTT   +N W K L  L + ++ N
Sbjct: 388 LLILNVHTILTTITKRNQWCKLLENLKLDRENN 420


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 603 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVN 701
           L I N+  ILTT   +N W K L  L + ++ N
Sbjct: 68  LLILNVHTILTTITKRNQWCKLLENLKLDRENN 100


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 603 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVN 701
           L I N+  ILTT   +N W K L  L + ++ N
Sbjct: 68  LLILNVHTILTTITKRNQWCKLLENLKLDRENN 100


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 167 SKVKQRITEPVTKDENVPLPPVRMSSDPA 253
           S    R  +P TK +  P P  R + +PA
Sbjct: 243 SSGSSRSHQPATKSKPRPAPASRNAPEPA 271


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 268  MDKQTEGTRLCDERYQSSSQAFN 336
            ++K T    LC  RYQ  ++A+N
Sbjct: 1449 VEKYTLEKLLCGTRYQVYAKAYN 1471


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 285 LCLFIHFTCLGAGSLDIRTGG 223
           L  F HF CL   +++IR  G
Sbjct: 26  LVTFAHFICLFPITINIRKNG 46


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 218 PLPPVRMSSDPAPKQ 262
           P PP ++S+ P P Q
Sbjct: 330 PPPPYQISAQPTPSQ 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,269
Number of Sequences: 336
Number of extensions: 5344
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)