Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_C01
         (900 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   4.1  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   5.5  
U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles ...    24   7.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.6  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 646  ERITGTNFWCT*LSSKKSTIFR 711
            ERI G  F CT  SSK ST  R
Sbjct: 1332 ERIAGETFECTSTSSKFSTSSR 1353


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -1

Query: 540 MFSTKNLALGPFGILDIHIYKSLIFLPSNKIHLLQFFISLISLTTYKFLLLS 385
           +F T NL +   GI  + +   + +LPS+    +   IS++   T  FLLL+
Sbjct: 240 LFYTVNLIIPCVGISFLSVL--VFYLPSDSGEKISLCISILLSLTVFFLLLA 289


>U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles
           gambiae putativetrypsin-like enzyme precursor, mRNA,
           partial cds. ).
          Length = 62

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 182 RITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 295
           R+  P+T    +   P+R+        V+WI+R RV +
Sbjct: 14  RLNSPITFTARIQ--PIRLPGPLGYPPVRWIHRYRVRI 49


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 224 PPVRMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKL-MPHHKTESKMERSK 397
           PP+ +      +Q        +++ +  G +H H  L+E+   L M HH+ + + ++ +
Sbjct: 690 PPIELHELQQQQQQNGGPTATIMMISTAGPHHPHDLLIEENNMLNMTHHQHQHQQQQQQ 748


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 909,955
Number of Sequences: 2352
Number of extensions: 18917
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)