Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_C01
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036741-1|AAH36741.1| 353|Homo sapiens brix domain containing ... 322 1e-87
BC001546-1|AAH01546.2| 353|Homo sapiens brix domain containing ... 322 1e-87
AY364244-1|AAQ76803.1| 353|Homo sapiens BRIX protein. 322 1e-87
AF347667-1|AAL83818.1| 354|Homo sapiens BRIX protein. 320 4e-87
BC006014-1|AAH06014.1| 335|Homo sapiens Unknown (protein for IM... 317 3e-86
AY364243-1|AAQ76802.1| 129|Homo sapiens BRIX protein. 117 5e-26
AK001962-1|BAA92003.1| 129|Homo sapiens protein ( Homo sapiens ... 117 5e-26
BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing ... 43 0.002
AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing ... 43 0.002
AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing ... 43 0.002
AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing ... 43 0.002
AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens ... 43 0.002
BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein pr... 33 1.4
BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open readi... 33 1.4
AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open readi... 33 1.4
AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens ... 33 1.4
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 7.5
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 7.5
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 7.5
BC016051-1|AAH16051.1| 349|Homo sapiens brix domain containing ... 30 10.0
AL844170-1|CAH71914.1| 349|Homo sapiens brix domain containing ... 30 10.0
AL359762-2|CAH70204.1| 349|Homo sapiens brix domain containing ... 30 10.0
AK022537-1|BAB14086.1| 349|Homo sapiens protein ( Homo sapiens ... 30 10.0
AF322053-1|AAL37236.1| 349|Homo sapiens RNA processing factor 1... 30 10.0
>BC036741-1|AAH36741.1| 353|Homo sapiens brix domain containing 2
protein.
Length = 353
Score = 322 bits (790), Expect = 1e-87
Identities = 146/238 (61%), Positives = 178/238 (74%), Gaps = 3/238 (1%)
Frame = +2
Query: 149 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 319
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 320 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 499
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 500 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 679
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 680 NYHPKSQPFFDHVYTFMVLDNRIWFRNYQILSEDGALAEIXPRFVLNPVKIFSGSFGG 853
YHPKSQPF DHV+TF +LDNRIWFRN+QI+ ED AL EI PRFVLN +KIF GSFGG
Sbjct: 193 RYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGPRFVLNLIKIFQGSFGG 250
>BC001546-1|AAH01546.2| 353|Homo sapiens brix domain containing 2
protein.
Length = 353
Score = 322 bits (790), Expect = 1e-87
Identities = 146/238 (61%), Positives = 178/238 (74%), Gaps = 3/238 (1%)
Frame = +2
Query: 149 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 319
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 320 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 499
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 500 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 679
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 680 NYHPKSQPFFDHVYTFMVLDNRIWFRNYQILSEDGALAEIXPRFVLNPVKIFSGSFGG 853
YHPKSQPF DHV+TF +LDNRIWFRN+QI+ ED AL EI PRFVLN +KIF GSFGG
Sbjct: 193 RYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGPRFVLNLIKIFQGSFGG 250
>AY364244-1|AAQ76803.1| 353|Homo sapiens BRIX protein.
Length = 353
Score = 322 bits (790), Expect = 1e-87
Identities = 146/238 (61%), Positives = 178/238 (74%), Gaps = 3/238 (1%)
Frame = +2
Query: 149 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 319
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 320 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 499
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 500 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 679
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 680 NYHPKSQPFFDHVYTFMVLDNRIWFRNYQILSEDGALAEIXPRFVLNPVKIFSGSFGG 853
YHPKSQPF DHV+TF +LDNRIWFRN+QI+ ED AL EI PRFVLN +KIF GSFGG
Sbjct: 193 RYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGPRFVLNLIKIFQGSFGG 250
>AF347667-1|AAL83818.1| 354|Homo sapiens BRIX protein.
Length = 354
Score = 320 bits (786), Expect = 4e-87
Identities = 136/196 (69%), Positives = 165/196 (84%)
Frame = +2
Query: 266 KWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNK 445
KW N++R+L+F+ RGIN R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNK
Sbjct: 55 KWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNK 114
Query: 446 CILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTK 625
CI FE +K +DLYMW+SN P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F +
Sbjct: 115 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 174
Query: 626 DPHYCLLKELLVQIFGVPNYHPKSQPFFDHVYTFMVLDNRIWFRNYQILSEDGALAEIXP 805
PHY LLKELL+QIF P YHPKSQPF DHV+TF +LDNRIWFRN+QI+ ED AL EI P
Sbjct: 175 LPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAALVEIGP 234
Query: 806 RFVLNPVKIFSGSFGG 853
RFVLN +KIF GSFGG
Sbjct: 235 RFVLNLIKIFQGSFGG 250
>BC006014-1|AAH06014.1| 335|Homo sapiens Unknown (protein for
IMAGE:3683425) protein.
Length = 335
Score = 317 bits (779), Expect = 3e-86
Identities = 145/238 (60%), Positives = 177/238 (74%), Gaps = 3/238 (1%)
Frame = +2
Query: 149 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 319
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVKEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 320 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 499
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 500 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 679
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 680 NYHPKSQPFFDHVYTFMVLDNRIWFRNYQILSEDGALAEIXPRFVLNPVKIFSGSFGG 853
YHPKSQPF D V+TF +LDNRIWFRN+QI+ ED AL EI PRFVLN +KIF GSFGG
Sbjct: 193 RYHPKSQPFVDLVFTFTILDNRIWFRNFQIIEEDAALVEIGPRFVLNLIKIFQGSFGG 250
>AY364243-1|AAQ76802.1| 129|Homo sapiens BRIX protein.
Length = 129
Score = 117 bits (282), Expect = 5e-26
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +2
Query: 149 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 319
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 320 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMW 490
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMW 129
>AK001962-1|BAA92003.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ11100 fis, clone PLACE1005550. ).
Length = 129
Score = 117 bits (282), Expect = 5e-26
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +2
Query: 149 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 319
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 320 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMW 490
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMW 129
>BC035314-1|AAH35314.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 530 VENIYTMGELKMTGNCLRGSRPLLSF-DPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPF 706
+EN ++ ++K C G++P+L F F Y LK LL+ F P
Sbjct: 121 IENFVSLKDIK-NSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 179
Query: 707 FDHVYTFMVLDNRIWFRNYQIL 772
++V F L+ +I+FR+Y++L
Sbjct: 180 LEYVLHFTALNGKIYFRSYKLL 201
>AL357515-8|CAH73396.1| 208|Homo sapiens brix domain containing 1
protein.
Length = 208
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 530 VENIYTMGELKMTGNCLRGSRPLLSF-DPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPF 706
+EN ++ ++K C G++P+L F F Y LK LL+ F P
Sbjct: 82 IENFVSLKDIK-NSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 140
Query: 707 FDHVYTFMVLDNRIWFRNYQIL 772
++V F L+ +I+FR+Y++L
Sbjct: 141 LEYVLHFTALNGKIYFRSYKLL 162
>AL357515-7|CAH73395.1| 214|Homo sapiens brix domain containing 1
protein.
Length = 214
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 530 VENIYTMGELKMTGNCLRGSRPLLSF-DPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPF 706
+EN ++ ++K C G++P+L F F Y LK LL+ F P
Sbjct: 88 IENFVSLKDIK-NSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 146
Query: 707 FDHVYTFMVLDNRIWFRNYQIL 772
++V F L+ +I+FR+Y++L
Sbjct: 147 LEYVLHFTALNGKIYFRSYKLL 168
>AL357515-6|CAH73394.1| 306|Homo sapiens brix domain containing 1
protein.
Length = 306
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 530 VENIYTMGELKMTGNCLRGSRPLLSF-DPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPF 706
+EN ++ ++K C G++P+L F F Y LK LL+ F P
Sbjct: 121 IENFVSLKDIK-NSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 179
Query: 707 FDHVYTFMVLDNRIWFRNYQIL 772
++V F L+ +I+FR+Y++L
Sbjct: 180 LEYVLHFTALNGKIYFRSYKLL 201
>AK024740-1|BAB14983.1| 253|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21087 fis, clone CAS03323. ).
Length = 253
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 530 VENIYTMGELKMTGNCLRGSRPLLSF-DPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPF 706
+EN ++ ++K C G++P+L F F Y LK LL+ F P
Sbjct: 121 IENFVSLKDIK-NSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 179
Query: 707 FDHVYTFMVLDNRIWFRNYQIL 772
++V F L+ +I+FR+Y++L
Sbjct: 180 LEYVLHFTALNGKIYFRSYKLL 201
>BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 33.1 bits (72), Expect = 1.4
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 269 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 439
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 240 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 299
Query: 440 NKCILFEGRK 469
+C+LF RK
Sbjct: 300 YECVLFVVRK 309
>BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 33.1 bits (72), Expect = 1.4
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 269 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 439
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 338 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 397
Query: 440 NKCILFEGRK 469
+C+LF RK
Sbjct: 398 YECVLFVVRK 407
>AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 33.1 bits (72), Expect = 1.4
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 269 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 439
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 338 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 397
Query: 440 NKCILFEGRK 469
+C+LF RK
Sbjct: 398 YECVLFVVRK 407
>AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ25795 fis, clone TST07031. ).
Length = 277
Score = 33.1 bits (72), Expect = 1.4
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 269 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 439
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 206 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 265
Query: 440 NKCILFEGRK 469
+C+LF RK
Sbjct: 266 YECVLFVVRK 275
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 152 KVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQ 283
++K+ K++++I EP+ + PLP DP + +K I +
Sbjct: 441 ELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEE 484
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 152 KVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQ 283
++K+ K++++I EP+ + PLP DP + +K I +
Sbjct: 462 ELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEE 505
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 152 KVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQ 283
++K+ K++++I EP+ + PLP DP + +K I +
Sbjct: 445 ELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEE 488
>BC016051-1|AAH16051.1| 349|Homo sapiens brix domain containing 5
protein.
Length = 349
Score = 30.3 bits (65), Expect = 10.0
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +2
Query: 491 ISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIF 670
+S++PNGP+A F + ++ E+K RG P P+ + L + ++F
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKR-----RGKDP-TEHIPEIILNNFTTRLGHSIGRMF 263
Query: 671 GVPNYHPKSQPFFD-HVYTFMVLDNRIWFR--NYQILSEDG-ALAEIXPRFVLNPVKIFS 838
+ P + F V TF + I+FR Y SE + E+ PRF L +
Sbjct: 264 A--SLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVGIQELGPRFTLKLRSLQK 321
Query: 839 GSFGGAHYGK 868
G+F + YG+
Sbjct: 322 GTF-DSKYGE 330
>AL844170-1|CAH71914.1| 349|Homo sapiens brix domain containing 5
protein.
Length = 349
Score = 30.3 bits (65), Expect = 10.0
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +2
Query: 491 ISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIF 670
+S++PNGP+A F + ++ E+K RG P P+ + L + ++F
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKR-----RGKDP-TEHIPEIILNNFTTRLGHSIGRMF 263
Query: 671 GVPNYHPKSQPFFD-HVYTFMVLDNRIWFR--NYQILSEDG-ALAEIXPRFVLNPVKIFS 838
+ P + F V TF + I+FR Y SE + E+ PRF L +
Sbjct: 264 A--SLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVGIQELGPRFTLKLRSLQK 321
Query: 839 GSFGGAHYGK 868
G+F + YG+
Sbjct: 322 GTF-DSKYGE 330
>AL359762-2|CAH70204.1| 349|Homo sapiens brix domain containing 5
protein.
Length = 349
Score = 30.3 bits (65), Expect = 10.0
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +2
Query: 491 ISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIF 670
+S++PNGP+A F + ++ E+K RG P P+ + L + ++F
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKR-----RGKDP-TEHIPEIILNNFTTRLGHSIGRMF 263
Query: 671 GVPNYHPKSQPFFD-HVYTFMVLDNRIWFR--NYQILSEDG-ALAEIXPRFVLNPVKIFS 838
+ P + F V TF + I+FR Y SE + E+ PRF L +
Sbjct: 264 A--SLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVGIQELGPRFTLKLRSLQK 321
Query: 839 GSFGGAHYGK 868
G+F + YG+
Sbjct: 322 GTF-DSKYGE 330
>AK022537-1|BAB14086.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ12475 fis, clone NT2RM1000962. ).
Length = 349
Score = 30.3 bits (65), Expect = 10.0
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +2
Query: 491 ISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIF 670
+S++PNGP+A F + ++ E+K RG P P+ + L + ++F
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKR-----RGKDP-TEHIPEIILNNFTTRLGHSIGRMF 263
Query: 671 GVPNYHPKSQPFFD-HVYTFMVLDNRIWFR--NYQILSEDG-ALAEIXPRFVLNPVKIFS 838
+ P + F V TF + I+FR Y SE + E+ PRF L +
Sbjct: 264 A--SLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVGIQELGPRFTLKLRSLQK 321
Query: 839 GSFGGAHYGK 868
G+F + YG+
Sbjct: 322 GTF-DSKYGE 330
>AF322053-1|AAL37236.1| 349|Homo sapiens RNA processing factor 1
protein.
Length = 349
Score = 30.3 bits (65), Expect = 10.0
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +2
Query: 491 ISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIF 670
+S++PNGP+A F + ++ E+K RG P P+ + L + ++F
Sbjct: 210 LSHLPNGPTAHFKMSSVRLRKEIKR-----RGKDP-TEHIPEIILNNFTTRLGHSIGRMF 263
Query: 671 GVPNYHPKSQPFFD-HVYTFMVLDNRIWFR--NYQILSEDG-ALAEIXPRFVLNPVKIFS 838
+ P + F V TF + I+FR Y SE + E+ PRF L +
Sbjct: 264 A--SLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFRSEKKVGIQELGPRFTLKLRSLQK 321
Query: 839 GSFGGAHYGK 868
G+F + YG+
Sbjct: 322 GTF-DSKYGE 330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,907,110
Number of Sequences: 237096
Number of extensions: 2768060
Number of successful extensions: 8452
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8452
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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