Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_B22
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389...    67   2e-11
03_02_0833 + 11624018-11624062,11624156-11624193,11624310-116243...    52   5e-07
07_01_0967 + 8107896-8107952,8108533-8108542,8109187-8109246,810...    45   1e-04
03_06_0575 - 34828347-34828535,34828619-34828723,34829425-348296...    44   2e-04
09_01_0144 - 2158924-2158962,2159180-2159315,2159393-2159499,215...    33   0.41 
09_04_0021 - 13861369-13861538,13862274-13862432,13862493-138627...    28   8.9  

>06_03_0099 + 16633928-16638213,16638299-16638386,16638823-16638950,
            16640008-16640278
          Length = 1590

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 38/94 (40%), Positives = 51/94 (54%)
 Frame = +1

Query: 568  EVPVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIV 747
            EVPVG V   NG+IIA   N V    + T HAEI CI +     +     ++L   +  +
Sbjct: 1409 EVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIREASNKLKT----WRL--ADTTL 1462

Query: 748  YVTVEPCIMCAAALNNLNIRXVVYGXPNDRLGGN 849
            YVT+EPC MCA A+    +  VV+G PN  LG +
Sbjct: 1463 YVTLEPCAMCAGAILQARVDTVVWGAPNKLLGAD 1496


>03_02_0833 +
           11624018-11624062,11624156-11624193,11624310-11624376,
           11624770-11624887,11625361-11625507,11626178-11626221,
           11627739-11627861
          Length = 193

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +1

Query: 568 EVPVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQIL 690
           EVPVGCV   +G++I+   N  NAT N TRHAE+  ID +L
Sbjct: 24  EVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDILL 64


>07_01_0967 +
           8107896-8107952,8108533-8108542,8109187-8109246,
           8109389-8109579,8109731-8109835,8109923-8110111
          Length = 203

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 25/83 (30%), Positives = 41/83 (49%)
 Frame = +1

Query: 574 PVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIVYV 753
           P G V   N +++    N V    +PT HAE+  I +  +  +L  I+      +  +Y 
Sbjct: 70  PFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACK--KLGKIELS----DCEIYA 123

Query: 754 TVEPCIMCAAALNNLNIRXVVYG 822
           + EPC MC  A++   I+ +VYG
Sbjct: 124 SCEPCPMCFGAVHLSRIKRLVYG 146


>03_06_0575 -
           34828347-34828535,34828619-34828723,34829425-34829615,
           34829747-34829806,34829975-34830104,34830374-34830448,
           34830598-34830608,34830722-34830737
          Length = 258

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 26/83 (31%), Positives = 41/83 (49%)
 Frame = +1

Query: 574 PVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIVYV 753
           P G V   N +I+    N V    +PT HAE+  I +  +  +L  I+      +  +Y 
Sbjct: 125 PFGAVVVRNDEIVVSCHNMVLDYTDPTAHAEVTAIREACK--KLGKIELS----DCEMYA 178

Query: 754 TVEPCIMCAAALNNLNIRXVVYG 822
           + EPC MC  A++   I+ +VYG
Sbjct: 179 SCEPCPMCFGAVHLSRIKRLVYG 201


>09_01_0144 -
           2158924-2158962,2159180-2159315,2159393-2159499,
           2159594-2160055,2162755-2162836,2164222-2164346,
           2164555-2164623,2164935-2165056,2165823-2165856
          Length = 391

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 745 VYVTVEPCIMCAAALNNLNIRXVVYGXPNDRLG 843
           +Y+  EPC MCA AL +   + + Y  PN   G
Sbjct: 325 IYLVWEPCSMCAMALVHQRFKRIFYAFPNPITG 357


>09_04_0021 -
           13861369-13861538,13862274-13862432,13862493-13862720,
           13864057-13864246
          Length = 248

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +2

Query: 146 KALLANLHWKLSLDQLMDLIVKELK*VGNDSGDCSRIYVENQTNFLN 286
           +A LA L WK   ++   + + + + VGND G    +Y E + N  N
Sbjct: 198 QAKLAELRWKKE-EENKAIEMSQTQAVGNDDGGQKEVYDEEEVNNTN 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,531,240
Number of Sequences: 37544
Number of extensions: 453584
Number of successful extensions: 850
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)