Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_B22
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC037955-1|AAH37955.2| 193|Homo sapiens DEADC1 protein protein. 105 2e-22
AL031320-2|CAD92490.1| 191|Homo sapiens protein ( Human DNA seq... 105 2e-22
BX538182-1|CAD98054.1| 144|Homo sapiens hypothetical protein pr... 92 3e-18
AK222473-1|BAD96193.1| 270|Homo sapiens single-strand selective... 85 3e-16
AK001235-1|BAA91571.1| 270|Homo sapiens protein ( Homo sapiens ... 85 3e-16
AF489699-1|AAL86910.1| 270|Homo sapiens SMUG1 protein. 85 3e-16
AF125182-1|AAD17301.1| 270|Homo sapiens single-strand selective... 85 3e-16
BC105607-1|AAI05608.1| 177|Homo sapiens SMUG1 protein protein. 39 0.022
BC088352-1|AAH88352.1| 177|Homo sapiens SMUG1 protein protein. 39 0.022
BC000417-1|AAH00417.1| 177|Homo sapiens SMUG1 protein protein. 39 0.022
BC011824-1|AAH11824.1| 351|Homo sapiens hypothetical protein BC... 36 0.15
>BC037955-1|AAH37955.2| 193|Homo sapiens DEADC1 protein protein.
Length = 193
Score = 105 bits (253), Expect = 2e-22
Identities = 46/93 (49%), Positives = 63/93 (67%)
Frame = +1
Query: 568 EVPVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIV 747
EVPVGC+ N +++ + +N VN T N TRHAE+ IDQ+L++CR + ++ ++
Sbjct: 43 EVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVL 102
Query: 748 YVTVEPCIMCAAALNNLNIRXVVYGXPNDRLGG 846
YVTVEPCIMCAAAL + I VVYG N+R GG
Sbjct: 103 YVTVEPCIMCAAALRLMKIPLVVYGCQNERFGG 135
>AL031320-2|CAD92490.1| 191|Homo sapiens protein ( Human DNA
sequence from clone RP1-20N2 on chromosome 6q24 Contains
the gene for a novel protein similar to yeast and
bacterial cytosine).
Length = 191
Score = 105 bits (253), Expect = 2e-22
Identities = 46/93 (49%), Positives = 63/93 (67%)
Frame = +1
Query: 568 EVPVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIV 747
EVPVGC+ N +++ + +N VN T N TRHAE+ IDQ+L++CR + ++ ++
Sbjct: 41 EVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVL 100
Query: 748 YVTVEPCIMCAAALNNLNIRXVVYGXPNDRLGG 846
YVTVEPCIMCAAAL + I VVYG N+R GG
Sbjct: 101 YVTVEPCIMCAAALRLMKIPLVVYGCQNERFGG 133
>BX538182-1|CAD98054.1| 144|Homo sapiens hypothetical protein
protein.
Length = 144
Score = 91.9 bits (218), Expect = 3e-18
Identities = 40/83 (48%), Positives = 56/83 (67%)
Frame = +1
Query: 598 NGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIVYVTVEPCIMC 777
N +++ + +N VN T N TRHAE+ IDQ+L++CR + ++ ++YVTVEPCIMC
Sbjct: 4 NNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMC 63
Query: 778 AAALNNLNIRXVVYGXPNDRLGG 846
AAAL + I VVYG N+R GG
Sbjct: 64 AAALRLMKIPLVVYGCQNERFGG 86
>AK222473-1|BAD96193.1| 270|Homo sapiens single-strand selective
monofunctional uracil DNA glycosylase variant protein.
Length = 270
Score = 85.0 bits (201), Expect = 3e-16
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +1
Query: 127 RDWLGIKGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWGLFKNLCGEPNKFFESSFVYNY 306
RDWLGI G V PP E RPV G +C ++EVSG RFWG F+NLCG+P FF FV+N
Sbjct: 105 RDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFHHCFVHNL 164
Query: 307 LP 312
P
Sbjct: 165 CP 166
>AK001235-1|BAA91571.1| 270|Homo sapiens protein ( Homo sapiens
cDNA FLJ10373 fis, clone NT2RM2001935. ).
Length = 270
Score = 85.0 bits (201), Expect = 3e-16
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +1
Query: 127 RDWLGIKGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWGLFKNLCGEPNKFFESSFVYNY 306
RDWLGI G V PP E RPV G +C ++EVSG RFWG F+NLCG+P FF FV+N
Sbjct: 105 RDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFHHCFVHNL 164
Query: 307 LP 312
P
Sbjct: 165 CP 166
>AF489699-1|AAL86910.1| 270|Homo sapiens SMUG1 protein.
Length = 270
Score = 85.0 bits (201), Expect = 3e-16
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +1
Query: 127 RDWLGIKGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWGLFKNLCGEPNKFFESSFVYNY 306
RDWLGI G V PP E RPV G +C ++EVSG RFWG F+NLCG+P FF FV+N
Sbjct: 105 RDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFHHCFVHNL 164
Query: 307 LP 312
P
Sbjct: 165 CP 166
>AF125182-1|AAD17301.1| 270|Homo sapiens single-strand selective
monofunctional uracil DNA glycosylase protein.
Length = 270
Score = 85.0 bits (201), Expect = 3e-16
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +1
Query: 127 RDWLGIKGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWGLFKNLCGEPNKFFESSFVYNY 306
RDWLGI G V PP E RPV G +C ++EVSG RFWG F+NLCG+P FF FV+N
Sbjct: 105 RDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWGFFRNLCGQPEVFFHHCFVHNL 164
Query: 307 LP 312
P
Sbjct: 165 CP 166
>BC105607-1|AAI05608.1| 177|Homo sapiens SMUG1 protein protein.
Length = 177
Score = 39.1 bits (87), Expect = 0.022
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 127 RDWLGIKGSVGKPPLEIKSRPVNGFDCKRTE 219
RDWLGI G V PP E RPV G +C ++E
Sbjct: 105 RDWLGIVGPVLTPPQEHPKRPVLGLECPQSE 135
>BC088352-1|AAH88352.1| 177|Homo sapiens SMUG1 protein protein.
Length = 177
Score = 39.1 bits (87), Expect = 0.022
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 127 RDWLGIKGSVGKPPLEIKSRPVNGFDCKRTE 219
RDWLGI G V PP E RPV G +C ++E
Sbjct: 105 RDWLGIVGPVLTPPQEHPKRPVLGLECPQSE 135
>BC000417-1|AAH00417.1| 177|Homo sapiens SMUG1 protein protein.
Length = 177
Score = 39.1 bits (87), Expect = 0.022
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 127 RDWLGIKGSVGKPPLEIKSRPVNGFDCKRTE 219
RDWLGI G V PP E RPV G +C ++E
Sbjct: 105 RDWLGIVGPVLTPPQEHPKRPVLGLECPQSE 135
>BC011824-1|AAH11824.1| 351|Homo sapiens hypothetical protein
BC011824 protein.
Length = 351
Score = 36.3 bits (80), Expect = 0.15
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 745 VYVTVEPCIMCAAALNNLNIRXVVYGXPN 831
+YVT EPC MCA AL + I V YG P+
Sbjct: 284 LYVTREPCAMCAMALVHARILRVFYGAPS 312
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,213,092
Number of Sequences: 237096
Number of extensions: 2637427
Number of successful extensions: 4175
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4175
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -