Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_B22
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-2|CAB05231.1| 176|Caenorhabditis elegans Hypothetical pr... 86 3e-17
AC006679-9|AAK84461.1| 153|Caenorhabditis elegans Hypothetical ... 41 0.001
AL023844-5|CAA19531.1| 168|Caenorhabditis elegans Hypothetical ... 37 0.017
Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical pr... 29 3.5
U49945-1|AAC47925.1| 414|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL117202-11|CAB55073.2| 287|Caenorhabditis elegans Hypothetical... 29 3.5
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 28 8.0
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 28 8.0
>Z82274-2|CAB05231.1| 176|Caenorhabditis elegans Hypothetical
protein JC8.4 protein.
Length = 176
Score = 86.2 bits (204), Expect = 3e-17
Identities = 44/93 (47%), Positives = 59/93 (63%)
Frame = +1
Query: 568 EVPVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIV 747
EVPVGCVF VNG I +N VN T +PTRHAE+ + ++ + D L K+ +
Sbjct: 29 EVPVGCVFVVNGTEIGRGRNRVNETGDPTRHAEMVAVTEMWKEHGTGCED--LLKKSTL- 85
Query: 748 YVTVEPCIMCAAALNNLNIRXVVYGXPNDRLGG 846
YV++EPCIMC++A+ L IR +VYG N R GG
Sbjct: 86 YVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGG 118
>AC006679-9|AAK84461.1| 153|Caenorhabditis elegans Hypothetical
protein R13A5.10 protein.
Length = 153
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +1
Query: 574 PVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIVYV 753
P G V +G++I N V T +PT HAE+ I + ++N D +Y
Sbjct: 22 PFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCK--NVDNFDL----SGCQLYT 75
Query: 754 TVEPCIMCAAALNNLNIRXVVYG 822
+ PC MC A + + YG
Sbjct: 76 SCYPCPMCMGAALWSRVDAIYYG 98
>AL023844-5|CAA19531.1| 168|Caenorhabditis elegans Hypothetical
protein Y48A6B.7 protein.
Length = 168
Score = 37.1 bits (82), Expect = 0.017
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 574 PVGCVFT-VNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYSKNVIVY 750
P G V NG+++A+ N V T +PT HAE+ I + L D + I+Y
Sbjct: 36 PFGAVVVDSNGKVVAKGHNMVLVTKDPTMHAEMTAIKNACK--ALGTFDLSGH----ILY 89
Query: 751 VTVEPCIMCAAALNNLNIRXVVYG 822
+ PC MC + YG
Sbjct: 90 TSCYPCPMCMGGCLWARFDAIYYG 113
>Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical
protein F49E12.5a protein.
Length = 335
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = -1
Query: 716 SMLFNLQYSRI*SMQLISACLVGLCVAFTLFFDSAIICPLT--VN---TQPTGTXXXXXX 552
++ FN Y ++ S+ I+ L+ L ++F++FF I PL+ VN PT +
Sbjct: 134 ALKFNRVYYKLKSIPGITLALITLSISFSMFFILTIDDPLSGYVNHCGFYPTYSQDKFHI 193
Query: 551 XXXXXXXXLI*STIFDLIF*RYNFKQILDK---SAINCFLLNSEVLCRPSYYCLQL 393
+ + +FD+ Y++++IL K S +N F + C + + + +
Sbjct: 194 FLDVTLYLAVFNFVFDIGLMYYSYQEILWKRSYSFVNRFQSRISLKCTQAIFIISI 249
>U49945-1|AAC47925.1| 414|Caenorhabditis elegans Hypothetical
protein C02H7.2 protein.
Length = 414
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -2
Query: 433 VKCFVVPVIIVYSSWTWMWHVYYLEITRSQIASIILHPLFLVNNYI 296
++ FVV ++ + + TW W Y ++ S+ A ++ LF +NN +
Sbjct: 274 IQFFVVSLVFLLTWTTWQWLPY---MSESKWAYFVMTSLFFINNSV 316
>AL117202-11|CAB55073.2| 287|Caenorhabditis elegans Hypothetical
protein Y47D3A.14 protein.
Length = 287
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 745 VYVTVEPCIMCAAALNNLNIRXVVYGXPNDRLG 843
V++ EPC MC+ AL + ++ V Y N R G
Sbjct: 210 VFLITEPCAMCSMALVHFRVKRVFYAR-NSRNG 241
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 254 FLNNPQNRFPLTSVLLQSNPLTGLDLISSGGLPT-EPFIPSQSL 126
+L NP N PL+S+ + + +L+++GG T +P PS ++
Sbjct: 508 YLKNPVNGAPLSSMSSGAEIIASKELLTNGGRSTHQPAAPSPAV 551
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 197 DLIVKELK*VGNDSGDCSRIYVENQTNFLNLV 292
DL K LK + + + IYVENQ NF+ +V
Sbjct: 923 DLYEKRLK-IQKEECEAKLIYVENQLNFIEMV 953
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,338,366
Number of Sequences: 27780
Number of extensions: 438960
Number of successful extensions: 1035
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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