Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_B16
         (971 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1201 - 11419851-11419913,11420090-11420311                       31   1.4  
03_06_0149 - 31987183-31987630,31987813-31987874                       30   3.2  
12_02_1188 + 26801833-26802225                                         29   4.2  
05_01_0373 + 2922604-2922921                                           29   5.6  
01_06_0993 + 33647301-33647618                                         29   5.6  
04_04_0384 - 24853689-24853727,24853802-24853861,24854311-248543...    29   7.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.8  
10_08_0223 - 15986763-15987575                                         28   9.8  

>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
 Frame = +2

Query: 620 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAXPPGKLPRALSCSDPAAYRIPVR-LSPFGK 790
           L PP          Q+WR+  PTG   + + P G LP A     PA  R P   L P   
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPSRV 72

Query: 791 RGAFS*LTLVGISVRGRSFAP 853
                 L  + + + G +F P
Sbjct: 73  AEGLFGLNGIEVGIEGDNFTP 93


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 809 AMRKRHASRREKGGQVSGKRQGRNRRAHEGAXQGXTP 699
           A+ + H   R +   +  +R+GR R AHEG   G  P
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIGAEP 112


>12_02_1188 + 26801833-26802225
          Length = 130

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 773 GGQVSGKRQGRNRRAHEGAXQGXTPGIFIVLSG 675
           GG  SGKR      AHEG  +G  P +++V  G
Sbjct: 33  GGGSSGKRSSSAAAAHEGVPEGHVP-VYVVGEG 64


>05_01_0373 + 2922604-2922921
          Length = 105

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -2

Query: 970 GCWPGGX*VGSYRXGXQXDSXRIRPXGXXERGXRAHSPXWSERPT 836
           G W GG   G    G +    R RP G   R  R  S  W  RPT
Sbjct: 33  GAWLGGTEAGGGAWGREGGRLRRRPSG--RRRLRPASATWWRRPT 75


>01_06_0993 + 33647301-33647618
          Length = 105

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -2

Query: 970 GCWPGGX*VGSYRXGXQXDSXRIRPXGXXERGXRAHSPXWSERPT 836
           G W GG   G    G +    R RP G   R  R  S  W  RPT
Sbjct: 33  GAWLGGTEAGGGAWGREGGRLRRRPSG--RRRLRPASATWWRRPT 75


>04_04_0384 -
           24853689-24853727,24853802-24853861,24854311-24854357,
           24854487-24854565,24855184-24855279,24855645-24855714,
           24855787-24855857,24856010-24856105,24856501-24856628,
           24856733-24856853
          Length = 268

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 740 SDPAAYRIPVRLSPFGKRGAFS*LTLVGISVRG 838
           S P ++ IPV     GK G F  +  +G  +RG
Sbjct: 165 SVPGSFEIPVAAQKLGKSGKFDAILCIGAVIRG 197


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 380 NESAN---ARGEAVCVLGALPLPRSLTRCAR 463
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_08_0223 - 15986763-15987575
          Length = 270

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = -1

Query: 773 GGQVSGKRQGRNRRAHEGAXQGXTPGIFIVLSGFATSDLSVDFCDARQGGGA----YGKT 606
           GG   G   G      +GA +  +  I +  S  +  D +  + DA  GGG     +G  
Sbjct: 146 GGSNGGSGYGAGAGVGQGAGESGS-SIAMAPSPSSGGDYNGGYADAAGGGGGGGGGHGGG 204

Query: 605 PATRPFYGSWPFAG 564
           PA  P YG    AG
Sbjct: 205 PAASPSYGVGAGAG 218


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,771,825
Number of Sequences: 37544
Number of extensions: 418957
Number of successful extensions: 1093
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2823252340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)