Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_B16
         (971 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   6.3  
AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr...    31   8.4  

>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -1

Query: 635 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 519
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
           protein.
          Length = 2789

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 659 SQRWRNPTGL*RYQAXPPGKLPRALSCSDPAAYRIPVRLS 778
           SQ W +  G   Y   PP K+  A  C D   +  P+ +S
Sbjct: 123 SQSWAHNMGSEDYDCIPPNKVTMAGQCKDQGNFSFPISVS 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,431,814
Number of Sequences: 237096
Number of extensions: 2177006
Number of successful extensions: 5360
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5360
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12936258326
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)