Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_B14
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0040 - 7665220-7666656                                           31   1.3  
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866...    29   4.1  
02_05_0076 + 25637752-25639062,25639221-25639297,25640962-256410...    29   4.1  
08_02_0368 - 16312961-16314588,16314794-16314890,16316360-163164...    28   9.4  
02_04_0131 - 20046033-20046505,20047140-20047233,20047343-200474...    28   9.4  
02_01_0162 - 1126273-1126593,1126950-1127117,1127211-1127501,112...    28   9.4  

>11_02_0040 - 7665220-7666656
          Length = 478

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 6/30 (20%)
 Frame = +1

Query: 520 PNSTKAVVY---INPPPRPR---PMTTWDV 591
           P+ST  VV    + PPPRPR   P+T+WDV
Sbjct: 2   PSSTVRVVSTRTVKPPPRPRERIPLTSWDV 31


>03_05_0969 +
           29283905-29284570,29284862-29284930,29286533-29286631,
           29287016-29287324
          Length = 380

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 229 PWLMKNLKGHPGTVLLMDFSANGKFMAA-TCDETV 330
           P LMK L GH      + FS +G  +A+ + DETV
Sbjct: 103 PRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETV 137


>02_05_0076 +
           25637752-25639062,25639221-25639297,25640962-25641095,
           25641178-25641242,25641431-25641482,25641912-25641994,
           25642128-25642221,25642332-25642861
          Length = 781

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +1

Query: 187 KKRPAWKGKTDFSHPWLMKNLKGHPGTVLLMDFSANGKFMAATCDETVASV 339
           K R   K   + S  ++ +++K H G++  + FS +G F+A+  ++ V  V
Sbjct: 298 KVRQYGKSYKELSGLFMNQDIKAHSGSIWSIKFSPDGHFLASAGEDCVIHV 348


>08_02_0368 -
           16312961-16314588,16314794-16314890,16316360-16316489,
           16316605-16316657
          Length = 635

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 142 PPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNL 249
           P C+ V E R   + ++  AW  K  F++PWL+  L
Sbjct: 575 PVCQ-VLERRFQSRPRRWMAWLKKKYFANPWLIAGL 609


>02_04_0131 -
           20046033-20046505,20047140-20047233,20047343-20047434,
           20047560-20047611,20047721-20047878,20048190-20048280,
           20048397-20049455
          Length = 672

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 217 DFSHPWLMKNLKGHPGTVLLMDFSANGKFMAATCDETVASV 339
           DF+  ++ + ++ H G + +M FS++G  +A+  ++ V  V
Sbjct: 247 DFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVRV 287


>02_01_0162 -
           1126273-1126593,1126950-1127117,1127211-1127501,
           1127688-1127763,1127841-1127886,1128006-1128072,
           1128162-1128234,1128321-1128561,1128669-1128822,
           1128915-1129042,1129481-1129535,1129629-1129838
          Length = 609

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 74  PATKTKRWRNVRERTILALSLMNRRVKPLRRHASAVKAKNAQHGKEKRTSAIPGL 238
           P    K    + +R    +S   R VK  RRH SA+ ++     +E R +AIP L
Sbjct: 80  PPVPRKLRSAINKRASQTVSTSPRHVKK-RRHLSAISSQTFLMDRETRCNAIPQL 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,651,121
Number of Sequences: 37544
Number of extensions: 565455
Number of successful extensions: 2062
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2060
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)