Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_B14
(945 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012938-1|AAH12938.1| 446|Homo sapiens TBL2 protein protein. 40 0.010
AY358518-1|AAQ88882.1| 447|Homo sapiens TBL2 protein. 40 0.010
AK074619-1|BAC11093.1| 447|Homo sapiens protein ( Homo sapiens ... 40 0.010
AF097485-1|AAF06824.1| 447|Homo sapiens transducin beta-like 2 ... 40 0.010
AF097484-1|AAF06823.1| 447|Homo sapiens transducin beta-like 2 ... 40 0.010
AF056183-1|AAD28083.1| 426|Homo sapiens WS beta-transducin repe... 40 0.010
AY744466-1|AAV30885.1| 278|Homo sapiens FSHD region gene 2 prot... 33 1.5
AY714545-1|AAU14220.1| 278|Homo sapiens FSHD region gene 2 prot... 33 1.5
AY028079-2|AAK21977.1| 278|Homo sapiens FSHD Region Gene 2 prot... 33 1.5
AL731696-1|CAH69901.1| 279|Homo sapiens novel protein similar t... 33 1.5
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 31 4.6
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 31 4.6
>BC012938-1|AAH12938.1| 446|Homo sapiens TBL2 protein protein.
Length = 446
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 88 QAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGT 267
+A EER PP ++ + + R + +F+H L LK H G
Sbjct: 33 RAGEERSGRPACQKANGFPPDKSSGSKKQKQYQRIRKEKPQQHNFTHRLLAAALKSHSGN 92
Query: 268 VLLMDFSANGKFMAATCDE 324
+ MDFS+NGK++A D+
Sbjct: 93 ISCMDFSSNGKYLATCADD 111
>AY358518-1|AAQ88882.1| 447|Homo sapiens TBL2 protein.
Length = 447
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 88 QAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGT 267
+A EER PP ++ + + R + +F+H L LK H G
Sbjct: 33 RAGEERSGRPACQKANGFPPDKSSGSKKQKQYQRIRKEKPQQHNFTHRLLAAALKSHSGN 92
Query: 268 VLLMDFSANGKFMAATCDE 324
+ MDFS+NGK++A D+
Sbjct: 93 ISCMDFSSNGKYLATCADD 111
>AK074619-1|BAC11093.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ90138 fis, clone HEMBB1000905, weakly similar to
TRANSCRIPTIONAL REPRESSOR RCO-1. ).
Length = 447
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 88 QAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGT 267
+A EER PP ++ + + R + +F+H L LK H G
Sbjct: 33 RAGEERSGRPACQKANGFPPDKSSGSKKQKQYQRIRKEKPQQHNFTHRLLAAALKSHSGN 92
Query: 268 VLLMDFSANGKFMAATCDE 324
+ MDFS+NGK++A D+
Sbjct: 93 ISCMDFSSNGKYLATCADD 111
>AF097485-1|AAF06824.1| 447|Homo sapiens transducin beta-like 2
protein.
Length = 447
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 88 QAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGT 267
+A EER PP ++ + + R + +F+H L LK H G
Sbjct: 33 RAGEERSGRPACQKANGFPPDKSSGSKKQKQYQRIRKEKPQQHNFTHRLLAAALKSHSGN 92
Query: 268 VLLMDFSANGKFMAATCDE 324
+ MDFS+NGK++A D+
Sbjct: 93 ISCMDFSSNGKYLATCADD 111
>AF097484-1|AAF06823.1| 447|Homo sapiens transducin beta-like 2
protein.
Length = 447
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 88 QAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGT 267
+A EER PP ++ + + R + +F+H L LK H G
Sbjct: 33 RAGEERSGRPACQKANGFPPDKSSGSKKQKQYQRIRKEKPQQHNFTHRLLAAALKSHSGN 92
Query: 268 VLLMDFSANGKFMAATCDE 324
+ MDFS+NGK++A D+
Sbjct: 93 ISCMDFSSNGKYLATCADD 111
>AF056183-1|AAD28083.1| 426|Homo sapiens WS beta-transducin repeats
protein protein.
Length = 426
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 88 QAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGT 267
+A EER PP ++ + + R + +F+H L LK H G
Sbjct: 12 RAGEERSGRPACQKANGFPPDKSSGSKKQKQYQRIRKEKPQQHNFTHRLLAAALKSHSGN 71
Query: 268 VLLMDFSANGKFMAATCDE 324
+ MDFS+NGK++A D+
Sbjct: 72 ISCMDFSSNGKYLATCADD 90
>AY744466-1|AAV30885.1| 278|Homo sapiens FSHD region gene 2 protein
protein.
Length = 278
Score = 33.1 bits (72), Expect = 1.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 133 TDEPPCEAVAETRVGGKSKKRPAWKGKTDFSH 228
TD+PP + ++ T G KK KGKT FSH
Sbjct: 19 TDQPPFQQISFTEKGSDEKKPFKEKGKTAFSH 50
>AY714545-1|AAU14220.1| 278|Homo sapiens FSHD region gene 2 protein
protein.
Length = 278
Score = 33.1 bits (72), Expect = 1.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 133 TDEPPCEAVAETRVGGKSKKRPAWKGKTDFSH 228
TD+PP + ++ T G KK KGKT FSH
Sbjct: 19 TDQPPFQQISFTEKGSDEKKPFKEKGKTAFSH 50
>AY028079-2|AAK21977.1| 278|Homo sapiens FSHD Region Gene 2 protein
protein.
Length = 278
Score = 33.1 bits (72), Expect = 1.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 133 TDEPPCEAVAETRVGGKSKKRPAWKGKTDFSH 228
TD+PP + ++ T G KK KGKT FSH
Sbjct: 19 TDQPPFQQISFTEKGSDEKKPFKEKGKTAFSH 50
>AL731696-1|CAH69901.1| 279|Homo sapiens novel protein similar to
FSHD Region Gene 2 protein protein.
Length = 279
Score = 33.1 bits (72), Expect = 1.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 133 TDEPPCEAVAETRVGGKSKKRPAWKGKTDFSH 228
TD+PP + ++ T G KK KGKT FSH
Sbjct: 19 TDQPPFQQISFTEKGSDEKKPFKEKGKTAFSH 50
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 602 NLFPGPKGDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHGG 781
N +P P + G++ T ++ D+ C RC + ++ G +++E C YH G
Sbjct: 942 NGYPFPHPERPGGAIIFT--AEEKRPKDSSCRTCCRCGTEYLVSSSGRCIRDEECYYHWG 999
Query: 782 VL 787
L
Sbjct: 1000 RL 1001
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 602 NLFPGPKGDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHGG 781
N +P P + G++ T ++ D+ C RC + ++ G +++E C YH G
Sbjct: 960 NGYPFPHPERPGGAIIFT--AEEKRPKDSSCRTCCRCGTEYLVSSSGRCIRDEECYYHWG 1017
Query: 782 VL 787
L
Sbjct: 1018 RL 1019
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,487,230
Number of Sequences: 237096
Number of extensions: 3009135
Number of successful extensions: 13775
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13770
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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