Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_B14
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83016-1|CAB05407.1|  451|Caenorhabditis elegans Hypothetical pr...    36   0.032
Z68314-8|CAA92666.1|  451|Caenorhabditis elegans Hypothetical pr...    36   0.032
Z54281-9|CAA91052.1|  451|Caenorhabditis elegans Hypothetical pr...    36   0.032
AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical...    33   0.22 
AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical ...    33   0.22 
Z75547-2|CAA99909.2|  622|Caenorhabditis elegans Hypothetical pr...    31   0.91 
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z75547-1|CAA99908.2|  621|Caenorhabditis elegans Hypothetical pr...    31   1.6  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   6.4  
Z73978-3|CAA98293.1|  501|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z83016-1|CAB05407.1|  451|Caenorhabditis elegans Hypothetical
           protein F46C5.9 protein.
          Length = 451

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +1

Query: 67  LYSCNKNQAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRP--AWKGKTD-FSHPWL 237
           +Y   K Q  E+ E +     + DE     ++E  V     +R    WK K   F HPW 
Sbjct: 28  IYVAKKEQQGEQEEVD----VVMDEVTETIISEEPVKKNKHQRTNDQWKAKEPTFVHPWN 83

Query: 238 MKNLKGHPGTVLLMDFSANG-KFMAATCDETV 330
           +  LKGH   V  + F+++G KF++ + D +V
Sbjct: 84  VSVLKGHKKEVTDVAFASDGKKFVSISGDRSV 115


>Z68314-8|CAA92666.1|  451|Caenorhabditis elegans Hypothetical
           protein F46C5.9 protein.
          Length = 451

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +1

Query: 67  LYSCNKNQAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRP--AWKGKTD-FSHPWL 237
           +Y   K Q  E+ E +     + DE     ++E  V     +R    WK K   F HPW 
Sbjct: 28  IYVAKKEQQGEQEEVD----VVMDEVTETIISEEPVKKNKHQRTNDQWKAKEPTFVHPWN 83

Query: 238 MKNLKGHPGTVLLMDFSANG-KFMAATCDETV 330
           +  LKGH   V  + F+++G KF++ + D +V
Sbjct: 84  VSVLKGHKKEVTDVAFASDGKKFVSISGDRSV 115


>Z54281-9|CAA91052.1|  451|Caenorhabditis elegans Hypothetical
           protein F46C5.9 protein.
          Length = 451

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +1

Query: 67  LYSCNKNQAVEERERENNSGTLTDEPPCEAVAETRVGGKSKKRP--AWKGKTD-FSHPWL 237
           +Y   K Q  E+ E +     + DE     ++E  V     +R    WK K   F HPW 
Sbjct: 28  IYVAKKEQQGEQEEVD----VVMDEVTETIISEEPVKKNKHQRTNDQWKAKEPTFVHPWN 83

Query: 238 MKNLKGHPGTVLLMDFSANG-KFMAATCDETV 330
           +  LKGH   V  + F+++G KF++ + D +V
Sbjct: 84  VSVLKGHKKEVTDVAFASDGKKFVSISGDRSV 115


>AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13b protein.
          Length = 490

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 472 LSPKRMWTLGYPLEIEPNSTKAVVYINPPPRP--RPMTTWDVNA 597
           L  K  +   YPLE++    KA VYI   P+    P  TWD++A
Sbjct: 246 LKVKAAYNKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDA 289


>AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13a protein.
          Length = 487

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 472 LSPKRMWTLGYPLEIEPNSTKAVVYINPPPRP--RPMTTWDVNA 597
           L  K  +   YPLE++    KA VYI   P+    P  TWD++A
Sbjct: 243 LKVKAAYNKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDA 286


>Z75547-2|CAA99909.2|  622|Caenorhabditis elegans Hypothetical
           protein R11D1.1b protein.
          Length = 622

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 211 KTDFSH-PWLMKNLKGHPGTVLLMDFSANGKFMAATCDE 324
           + DF H P+  K+++ H G +  + FS N +F+A+  D+
Sbjct: 49  RPDFQHRPFCQKDVREHTGCINALQFSHNDRFLASGGDD 87


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 130 LTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGH 258
           + DEPPCE   E  VG    +R  +   T    P+  K  KG+
Sbjct: 763 IMDEPPCEQAIEEGVGNVLLRRWYFDPATRLCQPFYYKGFKGN 805


>Z75547-1|CAA99908.2|  621|Caenorhabditis elegans Hypothetical
           protein R11D1.1a protein.
          Length = 621

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 211 KTDFSH-PWLMKNLKGHPGTVLLMDFSANGKFMAATCD 321
           + DF H P+  K+++ H G +  + FS N +F+A+  D
Sbjct: 49  RPDFQHRPFCQKDVREHTGCINALQFSHNDRFLASGDD 86


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 187 KKRPAWKGKTDFSHPWLMKNLKG 255
           K RP WKG T++++P     LKG
Sbjct: 264 KPRPGWKGDTEYNYPERNLPLKG 286


>Z73978-3|CAA98293.1|  501|Caenorhabditis elegans Hypothetical
           protein ZC302.2a protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 121 SGTLTDEPPCEAVAETRVGGKSKKRPAWKGKTDFSHPWLMKNLKGHPGTVLLMDFSANGK 300
           + T+   PP + VA T       K+P      +FS   L+K + GH  +V ++ FS  GK
Sbjct: 173 TSTIQVAPPRDPVAPTTSSSGITKKPE---NGEFS---LVKTISGHTKSVSVIKFSYCGK 226

Query: 301 FM 306
           ++
Sbjct: 227 YL 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,869,518
Number of Sequences: 27780
Number of extensions: 439623
Number of successful extensions: 1557
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)