Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_B10
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical... 44 2e-04
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 38 0.013
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 38 0.013
Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical pr... 31 0.85
AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical... 31 0.85
AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine re... 31 0.85
Z75543-3|CAA99877.1| 276|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical ... 30 2.0
Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF125448-8|AAD12813.2| 334|Caenorhabditis elegans Hypothetical ... 29 6.0
U80027-1|AAC48122.2| 338|Caenorhabditis elegans Serpentine rece... 28 7.9
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 28 7.9
U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
protein Y47D3A.29 protein.
Length = 1428
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 484 IGCNTGDLTRELYKLLKNLYPQCMLHILAVDIDSVL--INRAQESNTERNIEYTTANVMA 657
I C+TG L RE K L+ Q M +D+D+ + ++ AQ+ + +EY + +
Sbjct: 1338 IRCSTGVLRREYTS--KQLFDQQMFFRTILDVDAAVRKLSDAQKKAAKVRVEYNGCKIDS 1395
Query: 658 KSDRDSINE-YLKKNGRSMFDITFCFSVSMWI 750
D INE YL+KN + D+++ F+ M I
Sbjct: 1396 MMLADRINEKYLEKNAYNRVDLSYIFAPMMKI 1427
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 37.5 bits (83), Expect = 0.013
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 712 FDITFCFSVSMWIHLNNGDNGLREFW 789
FD+ S++ WIHLN GD+G+R F+
Sbjct: 260 FDVILALSITKWIHLNWGDDGMRRFF 285
Score = 34.3 bits (75), Expect = 0.12
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 322 KERTKDLDYFGSDPGAVKFGNFINYYSFH-NVAERINNLHPNMFPT-LTEDIYCLDIGCN 495
+ R + +YF ++GNF YY N E L ++F E LDIGCN
Sbjct: 107 ENRKQKTEYFNKK---YRYGNFDRYYGIRLNPGESDKRL--SVFQKDWFEHKQALDIGCN 161
Query: 496 TGDLTRELYKLLKNLYPQCMLHILAVDIDSVLINRAQES 612
G LT + K+ P+ I+ +DID LI A+++
Sbjct: 162 AGFLT---LSIAKDFSPR---RIIGIDIDEHLIGVARKN 194
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 37.5 bits (83), Expect = 0.013
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 712 FDITFCFSVSMWIHLNNGDNGLREFW 789
FD+ S++ WIHLN GD+G+R F+
Sbjct: 257 FDVILALSITKWIHLNWGDDGMRRFF 282
Score = 34.3 bits (75), Expect = 0.12
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 322 KERTKDLDYFGSDPGAVKFGNFINYYSFH-NVAERINNLHPNMFPT-LTEDIYCLDIGCN 495
+ R + +YF ++GNF YY N E L ++F E LDIGCN
Sbjct: 104 ENRKQKTEYFNKK---YRYGNFDRYYGIRLNPGESDKRL--SVFQKDWFEHKQALDIGCN 158
Query: 496 TGDLTRELYKLLKNLYPQCMLHILAVDIDSVLINRAQES 612
G LT + K+ P+ I+ +DID LI A+++
Sbjct: 159 AGFLT---LSIAKDFSPR---RIIGIDIDEHLIGVARKN 191
>Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 397 YSFHNVAERIN--NLHPNMFPTLTEDIYCLDIGCNTGDLTRELYK 525
YS +N + N NLHP+ T+TE + L++G +T ++ +L K
Sbjct: 317 YSTYNKRQYFNFENLHPDFCVTITEIVALLNLGISTENIEAKLCK 361
>AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 397 YSFHNVAERIN--NLHPNMFPTLTEDIYCLDIGCNTGDLTRELYK 525
YS +N + N NLHP+ T+TE + L++G +T ++ +L K
Sbjct: 317 YSTYNKRQYFNFENLHPDFCVTITEIVALLNLGISTENIEAKLCK 361
>AF047657-1|AAK18951.1| 328|Caenorhabditis elegans Serpentine
receptor, class j protein54 protein.
Length = 328
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -2
Query: 432 IVYSLSHVMK*IVVYKISKFNSPRITAKIIQIFSSFFHFYFPCCKCKYERLF 277
I+Y L+ M V K SKF + A ++Q F +FPC C Y +F
Sbjct: 221 IMYKLNK-MSVNVSKKTSKFQFELLRALVVQTVVPIFISFFPCLLCWYSPMF 271
>Z75543-3|CAA99877.1| 276|Caenorhabditis elegans Hypothetical
protein K01D12.3 protein.
Length = 276
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 310 EVKMKERTKDLDYFGSDPGAV 372
EVK+KE +D+FG+DP AV
Sbjct: 97 EVKLKELYPKIDFFGADPAAV 117
>AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical
protein Y39H10A.2 protein.
Length = 740
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = -3
Query: 728 QNVISNIDLPFFLRYSLIESRSLFAMTFAVVYSM-----FRSVLDS*ARFMSTESMSTAN 564
QN++ D+ +F+ + L ++ M+ ++ S +L S A F+++ + +
Sbjct: 442 QNIVGPKDICYFISWYLATDLQIYIMSPLILLSFGLGGAVVGLLISTAAFLASTAFNAYQ 501
Query: 563 MCNMH*G*RFFNSLYNSLVRSPVLQPMSRQYISSVKVGNIFGCKLFILSATL 408
M H F S YN + P+ P R+Y + + C+++I+ L
Sbjct: 502 MIFWH----FPPSDYNYGPKDPLYDPSKRRYAAWNYHNPLIRCQIYIMGMVL 549
>Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical
protein ZK909.2c protein.
Length = 548
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 539 FILNACCTYWPLTLTQYS*TVLKSLTPNETLNTQPQM 649
FIL+ C PL +T + +LTP+ T T P M
Sbjct: 31 FILHPLCRTGPLQMTVKASNSTTTLTPSSTTTTSPSM 67
>AF125448-8|AAD12813.2| 334|Caenorhabditis elegans Hypothetical
protein H14E04.1 protein.
Length = 334
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 418 ERINNLHPNMFPTL--TEDIYCLDIGCNTGDLTREL 519
E + +LH ++ L +E+++CLDIGC G + ++
Sbjct: 78 EALKSLHCHIAEKLELSENVHCLDIGCGIGGVMLDI 113
>U80027-1|AAC48122.2| 338|Caenorhabditis elegans Serpentine
receptor, class j protein11 protein.
Length = 338
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 645 CGCVFNVSFGVRLLSTVYEY*VNVNGQYVQHALR 544
CGC+ ++S+G+ ++ +Y Y V N + + LR
Sbjct: 96 CGCI-SLSYGILVIHFIYRYLVLFNTRIIDRLLR 128
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 722 VISNIDLPFFLRYSLIESRSLFAMTFAVVY-SMFRSVLDS*ARFMSTESM 576
++ + L L+YS + +LFA+TFA V+ S+ SV S R +T +M
Sbjct: 439 MVPGVFLNVVLKYSSMYDTNLFAITFAAVFASLVFSVFFSIWRSKTTPAM 488
>U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical
protein F37C12.1 protein.
Length = 323
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 393 VYKISKFNSPRITAK-IIQIFSSFFHFYFPCCKCKYERLF 277
+YK KFN R TA+ + F FYF C C E F
Sbjct: 52 IYKGKKFNMKRETAEGETYLGLKLFRFYFRCPNCLAEITF 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,713,372
Number of Sequences: 27780
Number of extensions: 424779
Number of successful extensions: 895
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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