Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_B08
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537519-1|CAD97771.1|  166|Homo sapiens hypothetical protein pr...    33   1.1  
BC053734-1|AAH53734.1|  266|Homo sapiens RAS-like, family 12 pro...    30   10.0 
AF233588-1|AAF60286.1|  266|Homo sapiens Ris protein.                  30   10.0 

>BX537519-1|CAD97771.1|  166|Homo sapiens hypothetical protein
           protein.
          Length = 166

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -1

Query: 615 LNKFWNWYSTLETSSALCFQSLTCQYLSPSTILSSTSRIIFIMMSRIL 472
           L K  N YS  +TSS LC  S   +YL+P T+        ++ +SRI+
Sbjct: 110 LCKLPNQYSVHKTSSPLCTSSAITRYLNPCTLFFKCWVQTWVFLSRII 157


>BC053734-1|AAH53734.1|  266|Homo sapiens RAS-like, family 12
           protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = -1

Query: 270 TRPTVIGSMVSIPRSAIPAARNGTAFCAEDFRQAVSFGRHGVINFAKSVASDATNAHANR 91
           TRP  I    ++P  A   AR+G A C  +    ++      +  AK V   ++ A + R
Sbjct: 193 TRPLFISEERALPHQAPLTARHGLASCTFNTLSTINLKEMPTVAQAKLVTVKSSRAQSKR 252

Query: 90  KQRT 79
           K  T
Sbjct: 253 KAPT 256


>AF233588-1|AAF60286.1|  266|Homo sapiens Ris protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = -1

Query: 270 TRPTVIGSMVSIPRSAIPAARNGTAFCAEDFRQAVSFGRHGVINFAKSVASDATNAHANR 91
           TRP  I    ++P  A   AR+G A C  +    ++      +  AK V   ++ A + R
Sbjct: 193 TRPLFISEERALPHQAPLTARHGLASCTFNTLSTINLKEMPTVAQAKLVTVKSSRAQSKR 252

Query: 90  KQRT 79
           K  T
Sbjct: 253 KAPT 256


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,835,747
Number of Sequences: 237096
Number of extensions: 2513073
Number of successful extensions: 9507
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9507
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)